RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TBL3Q12788 808 aaKnown RBP13.9□□□□□ -0.18
TGFB1-202ENST00000597453 RPS6KA2Q15349 733 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 SGO1Q5FBB7 561 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 SEM1Q6ZVN7 128 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 TAGAPQ8N103 731 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 OR4K14Q8NGD5 310 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 DIO2Q92813 273 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 TP53INP1Q96A56 240 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 PGM2Q96G03 612 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 OR10A5Q9H207 317 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 SSU72Q9NP77 194 aaKnown RBP13.9□□□□□ -0.18
TGFB1-202ENST00000597453 ACKR4Q9NPB9 350 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 FARSBQ9NSD9 589 aaKnown RBP13.9□□□□□ -0.18
TGFB1-202ENST00000597453 MED12Q93074 2177 aa13.9□□□□□ -0.18
TGFB1-202ENST00000597453 SETD2Q9BYW2 2564 aaPredicted RBP13.9□□□□□ -0.18
TGFB1-202ENST00000597453 ZNF469Q96JG9 3925 aaPredicted RBP13.89□□□□□ -0.19
TGFB1-202ENST00000597453 ANKRD33BA6NCL7 494 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 TRIM13O60858 407 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 CPMP14384 443 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 NT5EP21589 574 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 ALDH3A1P30838 453 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 XKP51811 444 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 CSTF3Q12996 717 aaKnown RBP13.89□□□□□ -0.19
TGFB1-202ENST00000597453 TCHHL1Q5QJ38 904 aaPredicted RBP13.89□□□□□ -0.19
TGFB1-202ENST00000597453 CCNYL2Q5T2Q4 361 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 COMMD6Q7Z4G1 85 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 EXOC3L1Q86VI1 746 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 ULK2Q8IYT8 1036 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 PRR22Q8IZ63 422 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 MMP21Q8N119 569 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 METTL4Q8N3J2 472 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 NEIL3Q8TAT5 605 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 METTL6Q8TCB7 284 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 SPPL2AQ8TCT8 520 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 ADIPOR1Q96A54 375 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 ZNF597Q96LX8 424 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 RILPQ96NA2 401 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 ZNF559Q9BR84 538 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 TRMOQ9BU70 441 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 MID1IP1Q9NPA3 183 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 QPCTLQ9NXS2 382 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 B4GALT7Q9UBV7 327 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 KCNN3Q9UGI6 736 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 ADAM29Q9UKF5 820 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 SLC12A4Q9UP95 1085 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 DTX4Q9Y2E6 619 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 NPFFR2Q9Y5X5 522 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 ACTL7BQ9Y614 415 aa13.89□□□□□ -0.19
TGFB1-202ENST00000597453 KDM4EB2RXH2 506 aaPredicted RBP13.88□□□□□ -0.19
TGFB1-202ENST00000597453 TP53I11O14683 189 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 ULK1O75385 1050 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 MYZAPP0CAP1 466 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 GABRA1P14867 456 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 S1PR1P21453 382 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 GDF1P27539 372 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 HTR6P50406 440 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 WNT3P56703 355 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 GALNT1Q10472 559 aaPredicted RBP13.88□□□□□ -0.19
TGFB1-202ENST00000597453 DUSP8Q13202 625 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 TBCELQ5QJ74 424 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 RIPPLY2Q5TAB7 128 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 FNDC7Q5VTL7 733 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 HLA-DQA1Q5Y7H0 255 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 TMEM198Q66K66 360 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 PAGE2Q7Z2X7 111 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 WDR53Q7Z5U6 358 aaPredicted RBP13.88□□□□□ -0.19
TGFB1-202ENST00000597453 TMEM200AQ86VY9 491 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 CLYBLQ8N0X4 340 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 LIX1Q8N485 282 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 GBP7Q8N8V2 638 aaPredicted RBP13.88□□□□□ -0.19
TGFB1-202ENST00000597453 SIMC1Q8NDZ2 872 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 NRGNQ92686 78 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 KCNA7Q96RP8 456 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 HBEGFQ99075 208 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 GATA5Q9BWX5 397 aaPredicted RBP13.88□□□□□ -0.19
TGFB1-202ENST00000597453 NXF5Q9H1B4 397 aaKnown RBP13.88□□□□□ -0.19
TGFB1-202ENST00000597453 CENPHQ9H3R5 247 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 RYDENQ9NUL5 291 aaKnown RBP13.88□□□□□ -0.19
TGFB1-202ENST00000597453 NMRK1Q9NWW6 199 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 AHSPQ9NZD4 102 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 CES1P1Q9UKY3 287 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 L3MBTL1Q9Y468 752 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 PCDHA9Q9Y5H5 950 aa13.88□□□□□ -0.19
TGFB1-202ENST00000597453 C15orf38-AP3S2A0A0A6YYH1 394 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 SERTM1A2A2V5 107 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 TM9SF1O15321 606 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 PORP16435 677 aaPredicted RBP13.87□□□□□ -0.19
TGFB1-202ENST00000597453 GPX3P22352 226 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 SOX18P35713 384 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 ETV4P43268 484 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 MAPK12P53778 367 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 FOXA1P55317 472 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 DUSP2Q05923 314 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 CRYZQ08257 329 aaKnown RBP13.87□□□□□ -0.19
TGFB1-202ENST00000597453 MGAT2Q10469 447 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 MYBPHQ13203 477 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 SNTB1Q13884 538 aaKnown RBP13.87□□□□□ -0.19
TGFB1-202ENST00000597453 NNATQ16517 81 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 SLC25A35Q3KQZ1 300 aa13.87□□□□□ -0.19
TGFB1-202ENST00000597453 ACSF3Q4G176 576 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms