RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 AHCTF1Q8WYP5 2266 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 A8MUI8 341 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 HMGN4O00479 90 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 ARPC2O15144 300 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 GSTA4O15217 222 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 NME6O75414 186 aaPredicted RBP13.65□□□□□ -0.22
VRK3-212ENST00000596814 UMODP07911 640 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 OR12D1P0DN82 309 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 STAT5AP42229 794 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 RBBP4Q09028 425 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 ZNF155Q12901 538 aaPredicted RBP13.65□□□□□ -0.22
VRK3-212ENST00000596814 DUSP8Q13202 625 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 KPNB1Q14974 876 aaKnown RBP13.65□□□□□ -0.22
VRK3-212ENST00000596814 VMACQ2NL98 169 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 FAM69BQ5VUD6 431 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 ZCCHC12Q6PEW1 402 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 C11orf65Q8NCR3 313 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 OR7G1Q8NGA0 311 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 SLC2A12Q8TD20 617 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 RAB8BQ92930 207 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 MAL2Q969L2 176 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 SENP5Q96HI0 755 aaPredicted RBP13.65□□□□□ -0.22
VRK3-212ENST00000596814 OR7D2Q96RA2 312 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 OR8D2Q9GZM6 311 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 NRSN2Q9GZP1 204 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 DENND2DQ9H6A0 471 aaPredicted RBP13.65□□□□□ -0.22
VRK3-212ENST00000596814 ASCL3Q9NQ33 180 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 THUMPD1Q9NXG2 353 aaKnown RBP13.65□□□□□ -0.22
VRK3-212ENST00000596814 ACTR3BQ9P1U1 418 aa13.65□□□□□ -0.22
VRK3-212ENST00000596814 C21orf140B9A014 251 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 ACOT8O14734 319 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 ASNA1O43681 348 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 GMNNO75496 209 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 DDAH2O95865 285 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 ARAFP10398 606 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 NCK1P16333 377 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 GGT1P19440 569 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 PCGF2P35227 344 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 RPS15P62841 145 aaKnown RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 DNASE1L3Q13609 305 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 CPEB2Q7Z5Q1 589 aaKnown RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 WDR53Q7Z5U6 358 aaPredicted RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 DHFR2Q86XF0 187 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 CDRT4Q8N9R6 151 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 ADAMTS15Q8TE58 950 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 FIG4Q92562 907 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 SLC9A6Q92581 669 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 NCLNQ969V3 563 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 OTUB1Q96FW1 271 aaPredicted RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 TRIM15Q9C019 465 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 OR10A5Q9H207 317 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 A4GALTQ9NPC4 353 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 P2RX2Q9UBL9 471 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 TCFL5Q9UL49 500 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 HEMK1Q9Y5R4 338 aaPredicted RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 CFAP54Q96N23 3096 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 IGHV3-20A0A0C4DH32 117 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 TMEM247A6NEH6 219 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 SAGE2PA6NJ88 616 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 DUXAA6NLW8 204 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 CXCR6O00574 342 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 PCDH17O14917 1159 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 DXOO77932 396 aaKnown RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 IGHEP01854 428 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 CLPSP04118 112 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 IGKV3-11P04433 115 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 ACP2P11117 423 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 ATP6V1B2P21281 511 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 DLSTP36957 453 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 MAN2A2P49641 1150 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 EMDP50402 254 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 ACTR3P61158 418 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 ELF3P78545 371 aaPredicted RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 EEF1A2Q05639 463 aaKnown RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 SCARB2Q14108 478 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 ZNF630Q2M218 657 aaPredicted RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 GLYATQ6IB77 296 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 LCN8Q6JVE9 175 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 PAPD4Q6PIY7 484 aaKnown RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 RNF111Q6ZNA4 994 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 PROSER1Q86XN7 944 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 ZNF615Q8N8J6 731 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 MORN4Q8NDC4 146 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 BHLHE22Q8NFJ8 381 aaPredicted RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 NFKBIDQ8NI38 313 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 ZNF721Q8TF20 911 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 XAGE5Q8WWM1 108 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 C8orf44Q96CB5 159 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 LRGUKQ96M69 825 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 LPAR4Q99677 370 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 MESP1Q9BRJ9 268 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 FOLH1BQ9HBA9 442 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 THSD1Q9NS62 852 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 COPS7AQ9UBW8 275 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 PRODH2Q9UF12 536 aa13.64□□□□□ -0.23
VRK3-212ENST00000596814 FARSAQ9Y285 508 aaKnown RBP13.64□□□□□ -0.23
VRK3-212ENST00000596814 LOC102723996A0A087X1L8 192 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 AGR2O95994 175 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 BCHEP06276 602 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms