RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 OR5K2Q8NHB8 316 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 ASB5Q8WWX0 329 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 GTF2H4Q92759 462 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 NEIL2Q969S2 332 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 APIPQ96GX9 242 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 RSRC1Q96IZ7 334 aaKnown RBP11.96□□□□□ -0.49
SCAF1-202ENST00000595242 FRMD6Q96NE9 622 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 CGREF1Q99674 301 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 HES7Q9BYE0 225 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 PCDHAC1Q9H158 963 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 ALG2Q9H553 416 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 SLC24A3Q9HC58 644 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 CCDC177Q9NQR7 707 aaPredicted RBP11.96□□□□□ -0.49
SCAF1-202ENST00000595242 ARMC1Q9NVT9 282 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 EDARQ9UNE0 448 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 MAPRE3Q9UPY8 281 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 RUVBL1Q9Y265 456 aaKnown RBP11.96□□□□□ -0.49
SCAF1-202ENST00000595242 DYRK1BQ9Y463 629 aa11.96□□□□□ -0.49
SCAF1-202ENST00000595242 ZNF839A8K0R7 811 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 IDSB3KWA1 339 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 FOXE1O00358 373 aaPredicted RBP11.95□□□□□ -0.5
SCAF1-202ENST00000595242 KCNH1O95259 989 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 PGRP06401 933 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 HEXAP06865 529 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 C1GALT1C1LP0DN25 315 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 ICAM2P13598 275 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 PEBP1P30086 187 aaKnown RBP11.95□□□□□ -0.5
SCAF1-202ENST00000595242 CHRNB4P30926 498 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 NEK2P51955 445 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 EMP2P54851 167 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 YBX1P67809 324 aaKnown RBP11.95□□□□□ -0.5
SCAF1-202ENST00000595242 FAM174BQ3ZCQ3 159 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 RABL3Q5HYI8 236 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 ZC3H12BQ5HYM0 836 aaKnown RBP11.95□□□□□ -0.5
SCAF1-202ENST00000595242 PAGE2BQ5JRK9 111 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 SPANXN4Q5MJ08 99 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 NOXRED1Q6NXP6 359 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 MED27Q6P2C8 311 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 GALNT18Q6P9A2 607 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 FGD2Q7Z6J4 655 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 SPATA24Q86W54 205 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 PDSS2Q86YH6 399 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 MARVELD2Q8N4S9 558 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 MDS2Q8NDY4 140 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 WFDC11Q8NEX6 87 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 ADCY4Q8NFM4 1077 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 OR7G3Q8NG95 312 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 SLC5A11Q8WWX8 675 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 RMND5BQ96G75 393 aaPredicted RBP11.95□□□□□ -0.5
SCAF1-202ENST00000595242 SIGLEC12Q96PQ1 595 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 ECSITQ9BQ95 431 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 HAUS8Q9BT25 410 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 MENTQ9BUN1 341 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 KLHL4Q9C0H6 718 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 IL1RL2Q9HB29 575 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 VPS29Q9UBQ0 182 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 PLAGL1Q9UM63 463 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 RNF6Q9Y252 685 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 ASF1AQ9Y294 204 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 TDRKHQ9Y2W6 561 aaKnown RBP11.95□□□□□ -0.5
SCAF1-202ENST00000595242 SNX13Q9Y5W8 968 aa11.95□□□□□ -0.5
SCAF1-202ENST00000595242 IGLV3-12A0A075B6K2 115 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 A0A096LPI6 279 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 HYKKA2RU49 373 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 FITM1A5D6W6 292 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 ARPC2O15144 300 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 ERN1O75460 977 aaKnown RBP11.94□□□□□ -0.5
SCAF1-202ENST00000595242 MED26O95402 600 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 PEX2P28328 305 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 LIPEQ05469 1076 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 TRIP10Q15642 601 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 MAPKAPK3Q16644 382 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 SPIN4Q56A73 249 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 NXPE4Q6UWF7 544 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 IZUMO2Q6UXV1 221 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 CAMKMTQ7Z624 323 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 TMPRSS11BQ86T26 416 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 TBC1D21Q8IYX1 336 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 LILRA2Q8N149 483 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 BEST3Q8N1M1 668 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 UBE2E3Q969T4 207 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 SLCO4A1Q96BD0 722 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 SCMH1Q96GD3 660 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 LRGUKQ96M69 825 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 ZNF285Q96NJ3 590 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 CCDC115Q96NT0 180 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 PELI2Q9HAT8 420 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 ENAMQ9NRM1 1142 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 ANKRD10Q9NXR5 420 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 SLAMF8Q9P0V8 285 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 GMPR2Q9P2T1 348 aaKnown RBP11.94□□□□□ -0.5
SCAF1-202ENST00000595242 CNOT11Q9UKZ1 510 aaKnown RBP11.94□□□□□ -0.5
SCAF1-202ENST00000595242 AP4S1Q9Y587 144 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 MXRA5Q9NR99 2828 aa11.94□□□□□ -0.5
SCAF1-202ENST00000595242 LOC102723996A0A087X1L8 192 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 TCRBV5S2A0A599 114 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 H0YJX3 145 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 GPIP06744 558 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 UMPSP11172 480 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 CD46P15529 392 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms