RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 EMC4Q5J8M3 183 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 CLEC6AQ6EIG7 209 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 PACS2Q86VP3 889 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 BANPQ8N9N5 519 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 SIMC1Q8NDZ2 872 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 OR9A2Q8NGT5 310 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 SPPL2AQ8TCT8 520 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 CA5BP1Q8WTZ4 195 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 CAVIN3Q969G5 261 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 SARAFQ96BY9 339 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 METTL2AQ96IZ6 378 aaKnown RBP14.02□□□□□ -0.17
TRIM28-203ENST00000593582 ZNF597Q96LX8 424 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 RILPQ96NA2 401 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 BBS4Q96RK4 519 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 GATA5Q9BWX5 397 aaPredicted RBP14.02□□□□□ -0.17
TRIM28-203ENST00000593582 TNFRSF12AQ9NP84 129 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 MIEF1Q9NQG6 463 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 QPCTLQ9NXS2 382 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 SENP1Q9P0U3 644 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 ACAD8Q9UKU7 415 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 WBP11Q9Y2W2 641 aaKnown RBP14.02□□□□□ -0.17
TRIM28-203ENST00000593582 HRH3Q9Y5N1 445 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 ADGRG4Q8IZF6 3080 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 GTF3C1Q12789 2109 aa14.02□□□□□ -0.17
TRIM28-203ENST00000593582 ITPR2Q14571 2701 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 CHEK2O96017 543 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 ABCB1P08183 1280 aaPredicted RBP14.01□□□□□ -0.17
TRIM28-203ENST00000593582 DRD5P21918 477 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 SOX18P35713 384 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 PPICP45877 212 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 MASP1P48740 699 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 EMDP50402 254 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 PLCXD2Q0VAA5 305 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 CEBPEQ15744 281 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 BICRALQ6AI39 1079 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 NOXRED1Q6NXP6 359 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 ZNF585AQ6P3V2 769 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 ACAD11Q709F0 780 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 HOMEZQ8IX15 550 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 LIX1Q8N485 282 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 OR5M9Q8NGP3 310 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 RND1Q92730 232 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 KAT2AQ92830 837 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 SDCCAG3Q96C92 435 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 FAM111AQ96PZ2 611 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 ANGPTL4Q9BY76 406 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 ACKR4Q9NPB9 350 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 MYNNQ9NPC7 610 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 PNPLA3Q9NST1 481 aa14.01□□□□□ -0.17
TRIM28-203ENST00000593582 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.01□□□□□ -0.173e-7■□□□□ 8
TRIM28-203ENST00000593582 POLR3HQ9Y535 204 aaPredicted RBP14.01□□□□□ -0.17
TRIM28-203ENST00000593582 V9GYY5 206 aaPredicted RBP14.01□□□□□ -0.17
TRIM28-203ENST00000593582 FRG2CA6NGY1 282 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 SLC28A1O00337 649 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 AZIN1O14977 448 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 RGS14O43566 566 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 SPAG7O75391 227 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 SEC22BO75396 215 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 ACVR2AP27037 513 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 GDF1P27539 372 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 CASP3P42574 277 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 PMPCAQ10713 525 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 CDSNQ15517 529 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 WLSQ5T9L3 541 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 FAM71E1Q6IPT2 247 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 IKBIPQ70UQ0 350 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 NUP54Q7Z3B4 507 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 TICAM1Q8IUC6 712 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 FAM9CQ8IZT9 166 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 MARVELD2Q8N4S9 558 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 PUM2Q8TB72 1066 aaKnown RBP eCLIP14□□□□□ -0.17
TRIM28-203ENST00000593582 OMA1Q96E52 524 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 STMN4Q9H169 189 aaPredicted RBP14□□□□□ -0.17
TRIM28-203ENST00000593582 METTL7AQ9H8H3 244 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 C1orf109Q9NX04 203 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 TNFRSF10DQ9UBN6 386 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 GPR55Q9Y2T6 319 aaPredicted RBP14□□□□□ -0.17
TRIM28-203ENST00000593582 FIS1Q9Y3D6 152 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 CCL27Q9Y4X3 112 aa14□□□□□ -0.17
TRIM28-203ENST00000593582 TO15178 435 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 NPHS1O60500 1241 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 PLOD3O60568 738 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 WDR1O75083 606 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 TRAPPC6AO75865 159 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 NEFHP12036 1026 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 COX6B1P14854 86 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 PRPH2P23942 346 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 ALDH3A1P30838 453 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 NCBP2P52298 156 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRIM28-203ENST00000593582 PSPHP78330 225 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 NEIL3Q8TAT5 605 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 TCP10LQ8TDR4 215 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 ASB5Q8WWX0 329 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 GNRHR2Q96P88 292 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 BTBD9Q96Q07 612 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 ANKRA2Q9H9E1 313 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 LRTM1Q9HBL6 345 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 EML4Q9HC35 981 aaKnown RBP13.99□□□□□ -0.17
TRIM28-203ENST00000593582 ALKBH4Q9NXW9 302 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 TAS2R9Q9NYW1 312 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms