RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	VN1R5	Q7Z5H4	357 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	PLCZ1	Q86YW0	608 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	SVOPL	Q8N434	492 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	GPATCH11	Q8N954	259 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	ZDHHC22	Q8N966	263 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	BBOF1	Q8ND07	529 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	CCT6B	Q92526	530 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	HIST1H2AH	Q96KK5	128 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	F2RL3	Q96RI0	385 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	HIST1H2AJ	Q99878	128 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	DHRS9	Q9BPW9	319 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	PIMREG	Q9BSJ6	248 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	H2AFJ	Q9BTM1	129 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	FANCF	Q9NPI8	374 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	ESM1	Q9NQ30	184 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	CAPN11	Q9UMQ6	739 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	SLC22A14	Q9Y267	594 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	EMC9	Q9Y3B6	208 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	SNX8	Q9Y5X2	465 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	PTGDR2	Q9Y5Y4	395 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	LOC390937	A0A1W2PQ73	354 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	ESYT3	A0FGR9	886 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	SYCE3	A1L190	88 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	PABPN1L	A6NDY0	278 aa	Known RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	ABCD4	O14678	606 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	PFDN6	O15212	129 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	SS18L1	O75177	396 aa	Predicted RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	H2AFY	O75367	372 aa	Known RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	CLEC3A	O75596	197 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	PPM1B	O75688	479 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	ALDOA	P04075	364 aa	Known RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	C1GALT1C1L	P0DN25	315 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	ALOX15	P16050	662 aa	Predicted RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	CPN2	P22792	545 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	ATP5A1	P25705	553 aa	Known RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	DEK	P35659	375 aa	Known RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	TMED10	P49755	219 aa	Known RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	FABP6	P51161	128 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	DVL1P1	P54792	670 aa	Predicted RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	CDH15	P55291	814 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	CTBP2	P56545	445 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	CLDN20	P56880	219 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	SESN2	P58004	480 aa	Predicted RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	HMGCS1	Q01581	520 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	DHX9	Q08211	1270 aa	Known RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	SP140	Q13342	867 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	SPRED3	Q2MJR0	410 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	MST1L	Q2TV78	715 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	HLA-DQA1	Q5Y7H0	255 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	NEPRO	Q6NW34	567 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619		Q6ZSR9	355 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	TMPRSS11B	Q86T26	416 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	THOC6	Q86W42	341 aa	Known RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	CCDC25	Q86WR0	208 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	GALNT12	Q8IXK2	581 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	ST13P4	Q8IZP2	240 aa	Predicted RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	GABRG1	Q8N1C3	465 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	FBXL14	Q8N1E6	418 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	ZNF615	Q8N8J6	731 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	ACOT4	Q8N9L9	421 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	OR5M1	Q8NGP8	315 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	FBF1	Q8TES7	1133 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	KCNJ9	Q92806	393 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	RIT1	Q92963	219 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	GMPPA	Q96IJ6	420 aa	Predicted RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	JMJD8	Q96S16	334 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	KIFC1	Q9BW19	673 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	OSBPL11	Q9BXB4	747 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	BPESC1	Q9GZL8	116 aa		5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	UNKL	Q9H9P5	680 aa	Known RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	ZNF490	Q9ULM2	529 aa	Predicted RBP	5.71	□□□□□ -1.5
DNMT1-222	ENST00000590619	GOLGA8Q	A0A0J9YX86	632 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	GOLGA8O	A6NCC3	632 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	GOLGA8N	F8WBI6	632 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	GOLGA8R	I6L899	631 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	RTCA	O00442	366 aa	Known RBP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	SEC14L5	O43304	696 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	LILRA1	O75019	489 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	UGT2B11	O75310	529 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	ZNF189	O75820	626 aa	Predicted RBP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	TJP3	O95049	919 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	GUCA1C	O95843	209 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	PLG	P00747	810 aa	Predicted RBP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	ADA	P00813	363 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	TACSTD2	P09758	323 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	CT62	P0C5K7	136 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	KRT15	P19012	456 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	OGN	P20774	298 aa	Known RBP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	IL32	P24001	234 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	CNTF	P26441	200 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	NPY2R	P49146	381 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	NRG3	P56975	720 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	MAP4K2	Q12851	820 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	CARTPT	Q16568	116 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	SGCB	Q16585	318 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	DEPDC1	Q5TB30	811 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	C18orf63	Q68DL7	685 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	ADNP2	Q6IQ32	1131 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	PAQR3	Q6TCH7	311 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms