RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 NUBPLQ8TB37 319 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 SLC22A8Q8TCC7 542 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 AGR3Q8TD06 166 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 NR4A3Q92570 626 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 EXOSC8Q96B26 276 aaKnown RBP9.59□□□□□ -0.87
SDF2-208ENST00000589788 METTL2AQ96IZ6 378 aaKnown RBP9.59□□□□□ -0.87
SDF2-208ENST00000589788 RASL10BQ96S79 203 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 SLX1AQ9BQ83 275 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 BRINP2Q9C0B6 783 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 MANSC1Q9H8J5 431 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 C1orf109Q9NX04 203 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 SIRT5Q9NXA8 310 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 HEY2Q9UBP5 337 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 ADAM21Q9UKJ8 722 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 UTS2RQ9UKP6 389 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 ENTPD4Q9Y227 616 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 POLR3KQ9Y2Y1 108 aaPredicted RBP9.59□□□□□ -0.87
SDF2-208ENST00000589788 TRAF6Q9Y4K3 522 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 PTGDR2Q9Y5Y4 395 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 TENM4Q6N022 2769 aa9.59□□□□□ -0.87
SDF2-208ENST00000589788 PRRC2CQ9Y520 2896 aaKnown RBP9.59□□□□□ -0.87
SDF2-208ENST00000589788 UBR5O95071 2799 aaPredicted RBP9.59□□□□□ -0.88
SDF2-208ENST00000589788 TMEM114B3SHH9 223 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 TMEM233B4DJY2 109 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 EIF4EBP3O60516 100 aaPredicted RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 OR6B1O95007 311 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 HSPA4LO95757 839 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 ATP1B1P05026 303 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 SERPINE1P05121 402 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 FGF4P08620 206 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 BGNP21810 368 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 SSTR4P31391 388 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 SLC37A1P57057 533 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 ALDH6A1Q02252 535 aaKnown RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 C2orf80Q0P641 193 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 MPEG1Q2M385 716 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 PIGGQ5H8A4 983 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 ATG16L1Q676U5 607 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 ZNF324BQ6AW86 544 aaPredicted RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 NOXRED1Q6NXP6 359 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 LINC00114Q6XXX2 140 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 RTL4Q6ZR62 310 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 RNF165Q6ZSG1 346 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 ZNF227Q86WZ6 799 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 LRRC25Q8N386 305 aaPredicted RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 FAM26EQ8N5C1 309 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 SLC15A4Q8N697 577 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 OR7G1Q8NGA0 311 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 LRRC8CQ8TDW0 803 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 TWIST2Q8WVJ9 160 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 ZNF75CPQ92670 426 aaPredicted RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 C11orf24Q96F05 449 aaPredicted RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 CNRIP1Q96F85 164 aaPredicted RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 WDR89Q96FK6 387 aaPredicted RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 WWTR1Q9GZV5 400 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 OR10A5Q9H207 317 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 LRTM1Q9HBL6 345 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 MYNNQ9NPC7 610 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 MIEF1Q9NQG6 463 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 EHD3Q9NZN3 535 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 SEC14L3Q9UDX4 400 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 BCAP29Q9UHQ4 241 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 WBP11Q9Y2W2 641 aaKnown RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 POLR3HQ9Y535 204 aaPredicted RBP9.58□□□□□ -0.88
SDF2-208ENST00000589788 DNAJC15Q9Y5T4 150 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 ZGRF1Q86YA3 2104 aa9.58□□□□□ -0.88
SDF2-208ENST00000589788 C2orf92A0A1B0GVN3 265 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 PEX1O43933 1283 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 SHOX2O60902 331 aaPredicted RBP9.57□□□□□ -0.88
SDF2-208ENST00000589788 SNNO75324 88 aaPredicted RBP9.57□□□□□ -0.88
SDF2-208ENST00000589788 AGFG2O95081 481 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 SNUPNO95149 360 aaKnown RBP9.57□□□□□ -0.88
SDF2-208ENST00000589788 CT62P0C5K7 136 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 ZNF24P17028 368 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 DDCP20711 480 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 PRPH2P23942 346 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 MST1P26927 711 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 LSP1P33241 339 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 MEOX1P50221 254 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 GNGT1P63211 74 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 BST1Q10588 318 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 FUT7Q11130 342 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 MAP4K2Q12851 820 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 STX3Q13277 289 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 EBPQ15125 230 aaKnown RBP9.57□□□□□ -0.88
SDF2-208ENST00000589788 GALNTL6Q49A17 601 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 CES4AQ5XG92 561 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 FAM180BQ6P0A1 224 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 FAM111BQ6SJ93 734 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 GFRALQ6UXV0 394 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 IKBIPQ70UQ0 350 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 MDGA2Q7Z553 956 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 TAGAPQ8N103 731 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 SVOPQ8N4V2 548 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 CPSF7Q8N684 471 aaKnown RBP9.57□□□□□ -0.88
SDF2-208ENST00000589788 POGLUT1Q8NBL1 392 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 PSD4Q8NDX1 1056 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 ADCY4Q8NFM4 1077 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 UBASH3BQ8TF42 649 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms