RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CCL11P51671 97 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 MNAT1P51948 309 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 PRKAG1P54619 331 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 CXADRP78310 365 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 DUSP8Q13202 625 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 HLA-DQA1Q5Y7H0 255 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 DLEU7Q6UYE1 221 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 TRPM8Q7Z2W7 1104 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 RETREG3Q86VR2 466 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 RPS19BP1Q86WX3 136 aaKnown RBP11.29□□□□□ -0.6
DNMT1-218ENST00000589294 C9orf40Q8IXQ3 194 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 KIF2BQ8N4N8 673 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 SLC15A4Q8N697 577 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 CDRT4Q8N9R6 151 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 SIMC1Q8NDZ2 872 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 HOXB13Q92826 284 aaPredicted RBP11.29□□□□□ -0.6
DNMT1-218ENST00000589294 ADIPOR1Q96A54 375 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 NEURL3Q96EH8 262 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 ZNF354BQ96LW1 612 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 MS4A4EQ96PG1 132 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 SLC35A5Q9BS91 424 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 WWTR1Q9GZV5 400 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 EPS8L2Q9H6S3 715 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 ANKRA2Q9H9E1 313 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 GID8Q9NWU2 228 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 GIN1Q9NXP7 522 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 MYOTQ9UBF9 498 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 TAGLN3Q9UI15 199 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 FAF1Q9UNN5 650 aaPredicted RBP11.29□□□□□ -0.6
DNMT1-218ENST00000589294 GPR55Q9Y2T6 319 aaPredicted RBP11.29□□□□□ -0.6
DNMT1-218ENST00000589294 PCDHB14Q9Y5E9 798 aa11.29□□□□□ -0.6
DNMT1-218ENST00000589294 NUP214P35658 2090 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 PCSK5Q92824 1860 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 RNF103-CHMP3A0A140T963 221 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 TMEM200CA6NKL6 621 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 DUXAA6NLW8 204 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 CCT8L1PA6NM43 557 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 MASP2O00187 686 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 MRASO14807 208 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 ACOX3O15254 700 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 HMGN2P05204 90 aaKnown RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 CELA2AP08217 269 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 HOXB9P17482 250 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 PPIBP23284 216 aaKnown RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 SOAT1P35610 550 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 CHI3L1P36222 383 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 MAP3K8P41279 467 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 TP53BP2Q13625 1128 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 NFYCQ13952 458 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 EBPQ15125 230 aaKnown RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 ZNHIT3Q15649 155 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 TBR1Q16650 682 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 PIGGQ5H8A4 983 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 CRB2Q5IJ48 1285 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 AGAP7PQ5VUJ5 663 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 SAXO2Q658L1 398 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 MFSD12Q6NUT3 480 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 POU5F2Q8N7G0 328 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 ZNF441Q8N8Z8 693 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 MIPOL1Q8TD10 442 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 BRIX1Q8TDN6 353 aaKnown RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 ZFP90Q8TF47 636 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 ROPN1LQ96C74 230 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 GIMAP5Q96F15 307 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 NSL1Q96IY1 281 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 LCORQ96JN0 433 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 VSTM2LQ96N03 204 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 CNTNAP3BQ96NU0 1288 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 AGAP4Q96P64 663 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 BTBD9Q96Q07 612 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 LMF1Q96S06 567 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 SH3GL1Q99961 368 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 LMF2Q9BU23 707 aaKnown RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 ACTRT3Q9BYD9 372 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 CNTNAP3Q9BZ76 1288 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 PRORYQ9H606 182 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 TPT1P8Q9HAU6 139 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 FOLH1BQ9HBA9 442 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 SLC6A13Q9NSD5 602 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 GPATCH2Q9NW75 528 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 STMN3Q9NZ72 180 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 SLAMF8Q9P0V8 285 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 YARS2Q9Y2Z4 477 aaKnown RBP11.28□□□□□ -0.6
DNMT1-218ENST00000589294 PCDHGB3Q9Y5G1 929 aa11.28□□□□□ -0.6
DNMT1-218ENST00000589294 TRBV5-3A0A0A0MS03 114 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 A6NL46 340 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 EVPLLA8MZ36 301 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 CLIC1O00299 241 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 TO15178 435 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 PRKNO60260 465 aaPredicted RBP11.27□□□□□ -0.61
DNMT1-218ENST00000589294 DNAJB5O75953 348 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 AGR2O95994 175 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 CT45A8P0DMV1 189 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 CT45A9P0DMV2 189 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 MATN1P21941 496 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 SOX11P35716 441 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 ANXA11P50995 505 aaKnown RBP11.27□□□□□ -0.61
DNMT1-218ENST00000589294 MLF1P58340 268 aa11.27□□□□□ -0.61
DNMT1-218ENST00000589294 GAB1Q13480 694 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms