RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 RELL2Q8NC24 303 aaPredicted RBP6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 RHEBL1Q8TAI7 183 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 UHMK1Q8TAS1 419 aaKnown RBP6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 NEIL3Q8TAT5 605 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 ATP6V1E2Q96A05 226 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 ADIPOR1Q96A54 375 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 SARAFQ96BY9 339 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 GPATCH1Q9BRR8 931 aaKnown RBP6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 DOHHQ9BU89 302 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 POLDIP3Q9BY77 421 aaKnown RBP6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 OR10A5Q9H207 317 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 ANKRA2Q9H9E1 313 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 CXorf21Q9HAI6 301 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 ZBTB26Q9HCK0 441 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 ACKR4Q9NPB9 350 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 ZDHHC18Q9NUE0 388 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 CCM2LQ9NUG4 571 aaPredicted RBP6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 NINJ2Q9NZG7 142 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 CRIM1Q9NZV1 1036 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 KCNN3Q9UGI6 736 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 PHF11Q9UIL8 331 aa6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 UTP11Q9Y3A2 253 aaKnown RBP6.9□□□□□ -1.3
GPATCH8-206ENST00000588554 KIAA1549Q9HCM3 1950 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 C17orf51A8MQB3 221 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 SYT5O00445 386 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 HCN1O60741 890 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 WDR1O75083 606 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 SBK3P0C264 359 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 BMP7P18075 431 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 NT5EP21589 574 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 SERPINB1P30740 379 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 FEN1P39748 380 aaKnown RBP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 BUD31P41223 144 aaPredicted RBP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 CASP3P42574 277 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 KIR2DL3P43628 341 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 SLCO1A2P46721 670 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 XKP51811 444 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 CDH13P55290 713 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 CRYZQ08257 329 aaKnown RBP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 MGAT2Q10469 447 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 FUT7Q11130 342 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 CUL3Q13618 768 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 EXOSC7Q15024 291 aaKnown RBP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 TOMM20Q15388 145 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 LTB4RQ15722 352 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 NTRK2Q16620 822 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 WIPI1Q5MNZ9 446 aaPredicted RBP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 RIPPLY2Q5TAB7 128 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 TMEM198Q66K66 360 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 YRDCQ86U90 279 aaKnown RBP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 NUDT13Q86X67 352 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 LIX1Q8N485 282 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 SLC15A4Q8N697 577 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 ADCY4Q8NFM4 1077 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 LINC01560Q8TB33 94 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 SPPL2AQ8TCT8 520 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 RILPQ96NA2 401 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 TRIB1Q96RU8 372 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 NODALQ96S42 347 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 HBEGFQ99075 208 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 SH3GL2Q99962 352 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 ANGPTL4Q9BY76 406 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 NXF5Q9H1B4 397 aaKnown RBP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 LYARQ9NX58 379 aaKnown RBP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 EHD3Q9NZN3 535 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 CNIH4Q9P003 139 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 ADGRE2Q9UHX3 823 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 DCTN4Q9UJW0 460 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 BOKQ9UMX3 212 aaPredicted RBP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 TSC22D4Q9Y3Q8 395 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 NPFFR2Q9Y5X5 522 aa6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 PHF3Q92576 2039 aaKnown RBP6.89□□□□□ -1.31
GPATCH8-206ENST00000588554 SETD2Q9BYW2 2564 aaPredicted RBP6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 SYNDIG1LA6NDD5 238 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 SYCE1LA8MT33 242 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 FOXE1O00358 373 aaPredicted RBP6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 ERAL1O75616 437 aaKnown RBP6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 EPPINO95925 133 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 PDYNP01213 254 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 ABCB1P08183 1280 aaPredicted RBP6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 CTAGE8P0CG41 777 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 CPMP14384 443 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 CHN1P15882 459 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 GPX3P22352 226 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 PIK3R1P27986 724 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 CEACAM8P31997 349 aaPredicted RBP6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 STARP49675 285 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 CDK9P50750 372 aaKnown RBP6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 ZNF136P52737 540 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 NAGLUP54802 743 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 CAV1Q03135 178 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 ILF2Q12905 390 aaKnown RBP6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 FOXF2Q12947 444 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 TRAF3Q13114 568 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 BIKQ13323 160 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 CEBPEQ15744 281 aa6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 ACSF3Q4G176 576 aaPredicted RBP6.88□□□□□ -1.31
GPATCH8-206ENST00000588554 TRMT12Q53H54 448 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms