RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ZNF469Q96JG9 3925 aaPredicted RBP12.51□□□□□ -0.41
HDAC5-208ENST00000588419 SETD2Q9BYW2 2564 aaPredicted RBP12.51□□□□□ -0.41
HDAC5-208ENST00000588419 CCDC189A1A4V9 331 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 C1orf226A1L170 272 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 SNPHO15079 494 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 ERN1O75460 977 aaKnown RBP12.5□□□□□ -0.41
HDAC5-208ENST00000588419 PDYNP01213 254 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 ABCB1P08183 1280 aaPredicted RBP12.5□□□□□ -0.41
HDAC5-208ENST00000588419 RBP1P09455 135 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 CTSSP25774 331 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 NAGLUP54802 743 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 MRPS35P82673 323 aaKnown RBP12.5□□□□□ -0.41
HDAC5-208ENST00000588419 GUCY2DQ02846 1103 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 DUSP2Q05923 314 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 PRICKLE4Q2TBC4 344 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 TEX35Q5T0J7 233 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 TIGD3Q6B0B8 471 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 SLC48A1Q6P1K1 146 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 KIF18BQ86Y91 864 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 METTL4Q8N3J2 472 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 SIMC1Q8NDZ2 872 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 UHMK1Q8TAS1 419 aaKnown RBP12.5□□□□□ -0.41
HDAC5-208ENST00000588419 GSX1Q9H4S2 264 aaPredicted RBP12.5□□□□□ -0.41
HDAC5-208ENST00000588419 ZBTB26Q9HCK0 441 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 PSD3Q9NYI0 1048 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 MAT2BQ9NZL9 334 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 ADAM29Q9UKF5 820 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 CFL2Q9Y281 166 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 PCDHA9Q9Y5H5 950 aa12.5□□□□□ -0.41
HDAC5-208ENST00000588419 A0A1B0GTL3 188 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 MBD3L4A6NDZ8 208 aaPredicted RBP12.49□□□□□ -0.41
HDAC5-208ENST00000588419 MBD3L3A6NE82 208 aaPredicted RBP12.49□□□□□ -0.41
HDAC5-208ENST00000588419 PRAMEF25A6NGN4 478 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 MBD3L5A6NJ08 208 aaPredicted RBP12.49□□□□□ -0.41
HDAC5-208ENST00000588419 CD8B2A6NJW9 211 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 POC1B-GALNT4F8VUJ3 575 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 STX16-NPEPL1H3BU86 382 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 STX16O14662 325 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 UGT2B11O75310 529 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 GUCY1B2O75343 617 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 RAF1P04049 648 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 PCSK2P16519 638 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 CSNK2A2P19784 350 aaPredicted RBP12.49□□□□□ -0.41
HDAC5-208ENST00000588419 OPRM1P35372 400 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 SOX18P35713 384 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 CPOXP36551 454 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 SLCO1A2P46721 670 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 CDH13P55290 713 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 FBXL19-AS1Q494R0 122 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 POMZP3Q6PJE2 187 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 TAOK1Q7L7X3 1001 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 GCNT2Q8N0V5 402 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 C1orf52Q8N6N3 182 aaKnown RBP12.49□□□□□ -0.41
HDAC5-208ENST00000588419 MBD3L2Q8NHZ7 208 aaPredicted RBP12.49□□□□□ -0.41
HDAC5-208ENST00000588419 HGDQ93099 445 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 LCORQ96JN0 433 aaPredicted RBP12.49□□□□□ -0.41
HDAC5-208ENST00000588419 ALPK1Q96QP1 1244 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 PAFAH2Q99487 392 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 TUBA1CQ9BQE3 449 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 NTMT1Q9BV86 223 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 RBM24Q9BX46 236 aaKnown RBP12.49□□□□□ -0.41
HDAC5-208ENST00000588419 ACSS3Q9H6R3 686 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 ANKRA2Q9H9E1 313 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
HDAC5-208ENST00000588419 DKKL1Q9UK85 242 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 TMCO1Q9UM00 188 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 ZNF780BQ9Y6R6 833 aa12.49□□□□□ -0.41
HDAC5-208ENST00000588419 HRNRQ86YZ3 2850 aaPredicted RBP12.49□□□□□ -0.41
HDAC5-208ENST00000588419 CLCA1A8K7I4 914 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 ICOSLGO75144 302 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 CDH16O75309 829 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 NME6O75414 186 aaPredicted RBP12.48□□□□□ -0.41
HDAC5-208ENST00000588419 REM1O75628 298 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 OR4F21O95013 312 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 CBX7O95931 251 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 EPXP11678 715 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 S1PR1P21453 382 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 PTGDSP41222 190 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 STARP49675 285 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 CKAP4Q07065 602 aaKnown RBP12.48□□□□□ -0.41
HDAC5-208ENST00000588419 GALNT1Q10472 559 aaPredicted RBP12.48□□□□□ -0.41
HDAC5-208ENST00000588419 FOXF2Q12947 444 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 TSNAXIP1Q2TAA8 658 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 TRMT12Q53H54 448 aaKnown RBP12.48□□□□□ -0.41
HDAC5-208ENST00000588419 NHSL2Q5HYW2 709 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 TCHHL1Q5QJ38 904 aaPredicted RBP12.48□□□□□ -0.41
HDAC5-208ENST00000588419 SLC30A6Q6NXT4 461 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 LETMD1Q6P1Q0 360 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 METTL2BQ6P1Q9 378 aaKnown RBP12.48□□□□□ -0.41
HDAC5-208ENST00000588419 ENPP6Q6UWR7 440 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 NUP54Q7Z3B4 507 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 IFNEQ86WN2 208 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 C17orf47Q8NEP4 570 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 SLC44A1Q8WWI5 657 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 TMBIM1Q969X1 311 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 INTS12Q96CB8 462 aaKnown RBP12.48□□□□□ -0.41
HDAC5-208ENST00000588419 LRRC1Q9BTT6 524 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 FAIM2Q9BWQ8 316 aa12.48□□□□□ -0.41
HDAC5-208ENST00000588419 CDC42EP4Q9H3Q1 356 aaKnown RBP12.48□□□□□ -0.41
HDAC5-208ENST00000588419 ZDHHC18Q9NUE0 388 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms