RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 FCRL1Q96LA6 429 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 ANKRA2Q9H9E1 313 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 CNIH4Q9P003 139 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 SUCOQ9UBS9 1254 aaKnown RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 BOKQ9UMX3 212 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 NPFFR2Q9Y5X5 522 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 CHCHD2Q9Y6H1 151 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 TMEM120BA0PK00 339 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 ITM2AO43736 263 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 PEX11AO75192 247 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 COQ9O75208 318 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 SLITRK5O94991 958 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 BGNP21810 368 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 GRK2P25098 689 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 ABCD3P28288 659 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 SOX18P35713 384 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 HPCAL1P37235 193 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 MC3RP41968 323 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 ASMTP46597 345 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 MAGOHP61326 146 aaKnown RBP13.64□□□□□ -0.23
ATG4D-207ENST00000587256 DCAF7P61962 342 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 RPP38P78345 283 aaKnown RBP13.64□□□□□ -0.23
ATG4D-207ENST00000587256 PDCD2Q16342 344 aaPredicted RBP13.64□□□□□ -0.23
ATG4D-207ENST00000587256 PRSS53Q2L4Q9 553 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 CMPK2Q5EBM0 449 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 CES4AQ5XG92 561 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 ANKRD26P1Q6NSI1 321 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 TMEM107Q6UX40 140 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 RGS9BPQ6ZS82 235 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 FNDC5Q8NAU1 212 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 OR7G2Q8NG99 324 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 TUBGCP3Q96CW5 907 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 HSPBAP1Q96EW2 488 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 JSRP1Q96MG2 331 aaPredicted RBP13.64□□□□□ -0.23
ATG4D-207ENST00000587256 DOHHQ9BU89 302 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 C1orf50Q9BV19 199 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 REEP4Q9H6H4 257 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 IL1RL2Q9HB29 575 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 SH2D2AQ9NP31 389 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 DDX18Q9NVP1 670 aaKnown RBP13.64□□□□□ -0.23
ATG4D-207ENST00000587256 TUBA8Q9NY65 449 aaPredicted RBP13.64□□□□□ -0.23
ATG4D-207ENST00000587256 TAS2R7Q9NYW3 318 aa13.64□□□□□ -0.23
ATG4D-207ENST00000587256 EXO1Q9UQ84 846 aaKnown RBP13.64□□□□□ -0.23
ATG4D-207ENST00000587256 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.64□□□□□ -0.23
ATG4D-207ENST00000587256 A1L4Q6 167 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 FRG2CA6NGY1 282 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 CCL21O00585 134 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 ACOX3O15254 700 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 PLOD3O60568 738 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 PPM1BO75688 479 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 SNUPNO95149 360 aaKnown RBP13.63□□□□□ -0.23
ATG4D-207ENST00000587256 BCKDHAP12694 445 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 GPC1P35052 558 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 CA7P43166 264 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 SLC1A6P48664 564 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 EMDP50402 254 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 CASP8Q14790 479 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 C3AR1Q16581 482 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 TBCELQ5QJ74 424 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 SPPL2CQ8IUH8 684 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 KIRREL3Q8IZU9 778 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 FAM109AQ8N4B1 249 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 TMEM251Q8N6I4 163 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 ZNF781Q8N8C0 355 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 OR52N2Q8NGI0 321 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 ZFP28Q8NHY6 868 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 OMA1Q96E52 524 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 ZNF764Q96H86 408 aaPredicted RBP13.63□□□□□ -0.23
ATG4D-207ENST00000587256 ZNF597Q96LX8 424 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 AMDHD1Q96NU7 426 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 DEFB127Q9H1M4 99 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 GLIPR2Q9H4G4 154 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 ZNF395Q9H8N7 513 aaPredicted RBP13.63□□□□□ -0.23
ATG4D-207ENST00000587256 FOLH1BQ9HBA9 442 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 TMBIM4Q9HC24 238 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 NKIRAS1Q9NYS0 192 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 TAS2R9Q9NYW1 312 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 B4GALT7Q9UBV7 327 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 BAIAP2L1Q9UHR4 511 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 TINAGQ9UJW2 476 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 CNOT11Q9UKZ1 510 aaKnown RBP13.63□□□□□ -0.23
ATG4D-207ENST00000587256 RAP2CQ9Y3L5 183 aa13.63□□□□□ -0.23
ATG4D-207ENST00000587256 COL12A1Q99715 3063 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 A0A1B0GTH9 108 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 ZNHIT1O43257 154 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 ERN1O75460 977 aaKnown RBP13.62□□□□□ -0.23
ATG4D-207ENST00000587256 PDE9AO76083 593 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 GLSO94925 669 aaPredicted RBP13.62□□□□□ -0.23
ATG4D-207ENST00000587256 DDX5P17844 614 aaKnown RBP13.62□□□□□ -0.23
ATG4D-207ENST00000587256 KRT20P35900 424 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 MAGEA5P43359 124 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 PPICP45877 212 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 MASP1P48740 699 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 CORO7P57737 925 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 HSPB3Q12988 150 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 STX3Q13277 289 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 ARHGAP11AQ6P4F7 1023 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 PAOXQ6QHF9 649 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 R3HCC1LQ7Z5L2 792 aaKnown RBP13.62□□□□□ -0.23
ATG4D-207ENST00000587256 SLC34A3Q8N130 599 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms