RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	ZCCHC12	Q6PEW1	402 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	OPN5	Q6U736	354 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	SPATA21	Q7Z572	469 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	FUNDC1	Q8IVP5	155 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	DND1	Q8IYX4	353 aa	Known RBP	11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	TAGAP	Q8N103	731 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	BEST3	Q8N1M1	668 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	NUP43	Q8NFH3	380 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	OR9I1	Q8NGQ6	314 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	SLC22A8	Q8TCC7	542 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	SFXN5	Q8TD22	340 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	TSPEAR	Q8WU66	669 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	FAM120B	Q96EK7	910 aa	Known RBP	11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	HSPBAP1	Q96EW2	488 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	LCOR	Q96JN0	433 aa	Predicted RBP	11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	VSTM2L	Q96N03	204 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	BTBD9	Q96Q07	612 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	OR52E6	Q96RD3	313 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	GAL3ST4	Q96RP7	486 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	RASL10B	Q96S79	203 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	UTP23	Q9BRU9	249 aa	Known RBP	11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	CXorf36	Q9H7Y0	433 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	FOLH1B	Q9HBA9	442 aa		11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	GPR55	Q9Y2T6	319 aa	Predicted RBP	11.41	□□□□□ -0.58
PKN1-208	ENST00000586900	SPTA1	P02549	2419 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	WWP2	O00308	870 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	T	O15178	435 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	CFLAR	O15519	480 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	SNX3	O60493	162 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	ERN1	O75460	977 aa	Known RBP	11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	SOX30	O94993	753 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	NADK	O95544	446 aa	Predicted RBP	11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	NAGA	P17050	411 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	EFNA1	P20827	205 aa	Predicted RBP	11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	MAP3K8	P41279	467 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	CCT3	P49368	545 aa	Known RBP	11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	CYB561	P49447	251 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	KCNK10	P57789	538 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	ARG2	P78540	354 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	TUBA3C	Q13748	450 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	TUBA3E	Q6PEY2	450 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	BHLHB9	Q6PI77	547 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900		Q6ZS92	163 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	CLECL1	Q8IZS7	167 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	TMEM156	Q8N614	296 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	HORMAD2	Q8N7B1	307 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	OR56A1	Q8NGH5	318 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	HOXB13	Q92826	284 aa	Predicted RBP	11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	MS4A4E	Q96PG1	132 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	ELAC2	Q9BQ52	826 aa	Known RBP	11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	LMF2	Q9BU23	707 aa	Known RBP	11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	ITPA	Q9BY32	194 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	TRIM4	Q9C037	500 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	NXF5	Q9H1B4	397 aa	Known RBP	11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	EPN3	Q9H201	632 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	RMND5A	Q9H871	391 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	ANKRA2	Q9H9E1	313 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	LIN28A	Q9H9Z2	209 aa	Known RBP	11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	PLA2G3	Q9NZ20	509 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	CCDC167	Q9P0B6	97 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	ADAM21	Q9UKJ8	722 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	ERVK-11	Q9UQG0	969 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	DTX4	Q9Y2E6	619 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	PCDHGB6	Q9Y5F9	930 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	BSN	Q9UPA5	3926 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	ATM	Q13315	3056 aa		11.4	□□□□□ -0.58
PKN1-208	ENST00000586900	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	TRAV17	A0A0B4J275	112 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	FRG2C	A6NGY1	282 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	CAPN14	A8MX76	684 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900		C9JVG2	144 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	SLC22A2	O15244	555 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	SHOX2	O60902	331 aa	Predicted RBP	11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	CPSF4	O95639	269 aa	Known RBP	11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	CT45A8	P0DMV1	189 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	CT45A9	P0DMV2	189 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	UQCRC2	P22695	453 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	CD96	P40200	585 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	TRPC1	P48995	793 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	PRIM2	P49643	509 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	TNFSF10	P50591	281 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	NR0B1	P51843	470 aa	Known RBP	11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	NRG3	P56975	720 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	PSG6	Q00889	435 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	KLRB1	Q12918	225 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	TLR1	Q15399	786 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	ZNHIT3	Q15649	155 aa	Predicted RBP	11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	MAPKAPK3	Q16644	382 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	VPS26B	Q4G0F5	336 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	AGK	Q53H12	422 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	CT45A2	Q5DJT8	189 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	EXOSC6	Q5RKV6	272 aa	Known RBP	11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	LYPD8	Q6UX82	237 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	PIGW	Q7Z7B1	504 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	ANKRD46	Q86W74	232 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	TRIML2	Q8N7C3	387 aa		11.39	□□□□□ -0.59
PKN1-208	ENST00000586900	CDRT4	Q8N9R6	151 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms