RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 GCNT6Q5T4J0 391 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 MLIPQ5VWP3 458 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 ANKRD26P1Q6NSI1 321 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 ZNF248Q8NDW4 579 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 CATSPER1Q8NEC5 780 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 OR10A6Q8NH74 314 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 STT3BQ8TCJ2 826 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 SLC26A7Q8TE54 656 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 WDR60Q8WVS4 1066 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 KCNE4Q8WWG9 221 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 RASSF5Q8WWW0 418 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 PMM1Q92871 262 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 TBC1D20Q96BZ9 403 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 SLC45A3Q96JT2 553 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 ZNF681Q96N22 645 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 MS4A4EQ96PG1 132 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 MESP1Q9BRJ9 268 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 RBCK1Q9BYM8 510 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 MAGIXQ9H6Y5 334 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 A4GALTQ9NPC4 353 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 MKKSQ9NPJ1 570 aaPredicted RBP11.82□□□□□ -0.52
VMP1-202ENST00000585847 ARMC1Q9NVT9 282 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 GIN1Q9NXP7 522 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 CALML5Q9NZT1 146 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 TRPC4Q9UBN4 977 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 LIPT1Q9Y234 373 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 ANGPT4Q9Y264 503 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 FARSAQ9Y285 508 aaKnown RBP11.82□□□□□ -0.52
VMP1-202ENST00000585847 PCDHGA6Q9Y5G7 932 aa11.82□□□□□ -0.52
VMP1-202ENST00000585847 CROCCQ5TZA2 2017 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 DHRS12A0PJE2 317 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 C21orf140B9A014 251 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 TGFBR3LH3BV60 316 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 EMC8O43402 210 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 PLOD3O60568 738 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 PRKRAO75569 313 aaKnown RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 ERAL1O75616 437 aaKnown RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 AK1P00568 194 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 GUSBP08236 651 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 ZGLP1P0C6A0 271 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 PLA2G2AP14555 144 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 GCKP35557 465 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 CDKN2CP42773 168 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 XCR1P46094 333 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 CCT3P49368 545 aaKnown RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 PRIM2P49643 509 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 XKP51811 444 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 RHAGQ02094 409 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 SLC34A1Q06495 639 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 CCNIQ14094 377 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 BROXQ5VW32 411 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 C18orf63Q68DL7 685 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 SHISA6Q6ZSJ9 500 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 PATL1Q86TB9 770 aaKnown RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 SPATA24Q86W54 205 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 SPACA3Q8IXA5 215 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 ST13P4Q8IZP2 240 aaPredicted RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 MMP21Q8N119 569 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 OR2L13Q8N349 312 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 IL22RA1Q8N6P7 574 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 OIT3Q8WWZ8 545 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 CIDECQ96AQ7 238 aaPredicted RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 CNRIP1Q96F85 164 aaPredicted RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 SPATA5L1Q9BVQ7 753 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 GLIPR2Q9H4G4 154 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 SOX17Q9H6I2 414 aaPredicted RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 EPS8L2Q9H6S3 715 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 TRIM45Q9H8W5 580 aaPredicted RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 S100A14Q9HCY8 104 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 ZCCHC3Q9NUD5 404 aaKnown RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 DDX18Q9NVP1 670 aaKnown RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 NXT1Q9UKK6 140 aaKnown RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 TCFL5Q9UL49 500 aa11.81□□□□□ -0.52
VMP1-202ENST00000585847 FAF1Q9UNN5 650 aaPredicted RBP11.81□□□□□ -0.52
VMP1-202ENST00000585847 CXCR6O00574 342 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 KLK10O43240 276 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 HNRNPRO43390 633 aaKnown RBP11.8□□□□□ -0.52
VMP1-202ENST00000585847 TNFRSF21O75509 655 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 GSNP06396 782 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 TCN1P20061 433 aaPredicted RBP11.8□□□□□ -0.52
VMP1-202ENST00000585847 GZMMP51124 257 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 TLE3Q04726 772 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 HSPB3Q12988 150 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 IL10RAQ13651 578 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 GK3PQ14409 553 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 RCN1Q15293 331 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 PRSS53Q2L4Q9 553 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 FAM98BQ52LJ0 330 aaKnown RBP11.8□□□□□ -0.52
VMP1-202ENST00000585847 GLYATQ6IB77 296 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 QSOX2Q6ZRP7 698 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 CCDC80Q76M96 950 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 PRSS58Q8IYP2 241 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 LGI4Q8N135 537 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 ZNF843Q8N446 348 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 AMER2Q8N7J2 671 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 PAPD5Q8NDF8 572 aaKnown RBP11.8□□□□□ -0.52
VMP1-202ENST00000585847 HIPK4Q8NE63 616 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 SUN3Q8TAQ9 357 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 ADAMTS17Q8TE56 1095 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 LZICQ8WZA0 190 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms