RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 C16orf52Q8NHV5 167 aa17.02■□□□□ 0.32
RFFL-211ENST00000584541 ANKRD27Q96NW4 1050 aa17.02■□□□□ 0.32
RFFL-211ENST00000584541 DEFB126Q9BYW3 111 aa17.02■□□□□ 0.32
RFFL-211ENST00000584541 SLC25A37Q9NYZ2 338 aa17.02■□□□□ 0.32
RFFL-211ENST00000584541 HEMK1Q9Y5R4 338 aaPredicted RBP17.02■□□□□ 0.32
RFFL-211ENST00000584541 PCSK5Q92824 1860 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 TRBV5-3A0A0A0MS03 114 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 TTC36A6NLP5 189 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 ZFAND5O76080 213 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 PSMG1O95456 288 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 CLPSP04118 112 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 HMGN2P05204 90 aaKnown RBP17.01■□□□□ 0.31
RFFL-211ENST00000584541 SERPINA7P05543 415 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 T-ENOLP0DO92 83 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 MATN1P21941 496 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 EMDP50402 254 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 RASSF2P50749 326 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 TXNL4AP83876 142 aaKnown RBP17.01■□□□□ 0.31
RFFL-211ENST00000584541 BNIP1Q12981 228 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 LASP1Q14847 261 aaKnown RBP17.01■□□□□ 0.31
RFFL-211ENST00000584541 MYBPC3Q14896 1274 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 IRAK1BP1Q5VVH5 260 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 PROSER1Q86XN7 944 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 MSRB3Q8IXL7 192 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 CDRT4Q8N9R6 151 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 SIMC1Q8NDZ2 872 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 ELP5Q8TE02 316 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 JADE3Q92613 823 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 AURKBQ96GD4 344 aaPredicted RBP17.01■□□□□ 0.31
RFFL-211ENST00000584541 THUMPD3Q9BV44 507 aaKnown RBP17.01■□□□□ 0.31
RFFL-211ENST00000584541 ACTRT3Q9BYD9 372 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 FOLH1BQ9HBA9 442 aa17.01■□□□□ 0.31
RFFL-211ENST00000584541 GIMAP1-GIMAP5A0A087WTJ2 511 aa17■□□□□ 0.31
RFFL-211ENST00000584541 C2orf92A0A1B0GVN3 265 aa17■□□□□ 0.31
RFFL-211ENST00000584541 ARGFXA6NJG6 315 aa17■□□□□ 0.31
RFFL-211ENST00000584541 FXYD1O00168 92 aa17■□□□□ 0.31
RFFL-211ENST00000584541 SOX30O94993 753 aa17■□□□□ 0.31
RFFL-211ENST00000584541 MAGEA8P43361 318 aa17■□□□□ 0.31
RFFL-211ENST00000584541 KHKP50053 298 aa17■□□□□ 0.31
RFFL-211ENST00000584541 TMPRSS3P57727 454 aa17■□□□□ 0.31
RFFL-211ENST00000584541 DCAF7P61962 342 aa17■□□□□ 0.31
RFFL-211ENST00000584541 RNF4P78317 190 aa17■□□□□ 0.31
RFFL-211ENST00000584541 CACNA1BQ00975 2339 aa17■□□□□ 0.31
RFFL-211ENST00000584541 TLE3Q04726 772 aa17■□□□□ 0.31
RFFL-211ENST00000584541 DUSP8Q13202 625 aa17■□□□□ 0.31
RFFL-211ENST00000584541 NANOGP8Q6NSW7 305 aa17■□□□□ 0.31
RFFL-211ENST00000584541 MFSD12Q6NUT3 480 aa17■□□□□ 0.31
RFFL-211ENST00000584541 JMJD6Q6NYC1 403 aaPredicted RBP17■□□□□ 0.31
RFFL-211ENST00000584541 CDC73Q6P1J9 531 aa17■□□□□ 0.31
RFFL-211ENST00000584541 RNF130Q86XS8 419 aa17■□□□□ 0.31
RFFL-211ENST00000584541 OR8J3Q8NGG0 315 aa17■□□□□ 0.31
RFFL-211ENST00000584541 OR52N2Q8NGI0 321 aa17■□□□□ 0.31
RFFL-211ENST00000584541 PNPT1Q8TCS8 783 aaKnown RBP17■□□□□ 0.31
RFFL-211ENST00000584541 GIMAP5Q96F15 307 aa17■□□□□ 0.31
RFFL-211ENST00000584541 GAL3ST4Q96RP7 486 aa17■□□□□ 0.31
RFFL-211ENST00000584541 CPPED1Q9BRF8 314 aaPredicted RBP17■□□□□ 0.31
RFFL-211ENST00000584541 SLC39A3Q9BRY0 314 aa17■□□□□ 0.31
RFFL-211ENST00000584541 EPS8L2Q9H6S3 715 aa17■□□□□ 0.31
RFFL-211ENST00000584541 NANOGQ9H9S0 305 aa17■□□□□ 0.31
RFFL-211ENST00000584541 GPATCH2Q9NW75 528 aa17■□□□□ 0.31
RFFL-211ENST00000584541 AP3M1Q9Y2T2 418 aa17■□□□□ 0.31
RFFL-211ENST00000584541 GMEB1Q9Y692 573 aa17■□□□□ 0.31
RFFL-211ENST00000584541 TPRP12270 2363 aaKnown RBP16.99■□□□□ 0.31
RFFL-211ENST00000584541 DUXAA6NLW8 204 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 UNC5CO95185 931 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 AGR2O95994 175 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 ALOX5P09917 674 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 CRATP43155 626 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 PSME3P61289 254 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 FADDQ13158 208 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 EBPQ15125 230 aaKnown RBP16.99■□□□□ 0.31
RFFL-211ENST00000584541 DEFB109BQ30KR1 87 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 C9orf40Q8IXQ3 194 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 PGAM4Q8N0Y7 254 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 KIF2BQ8N4N8 673 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 NUBPLQ8TB37 319 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 ADAMTS15Q8TE58 950 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 SLC9A6Q92581 669 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 THOC3Q96J01 351 aaKnown RBP16.99■□□□□ 0.31
RFFL-211ENST00000584541 YIPF4Q9BSR8 244 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 ITPAQ9BY32 194 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 WWTR1Q9GZV5 400 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 C1orf21Q9H246 121 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 ZNF223Q9UK11 482 aaPredicted RBP16.99■□□□□ 0.31
RFFL-211ENST00000584541 L3MBTL1Q9Y468 752 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 PCDHGB3Q9Y5G1 929 aa16.99■□□□□ 0.31
RFFL-211ENST00000584541 A0A087WV48 116 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 CELA2AP08217 269 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 ITGAMP11215 1152 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 ITGA3P26006 1051 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 PPICP45877 212 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 MTPNP58546 118 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 SLC25A3Q00325 362 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.98■□□□□ 0.31
RFFL-211ENST00000584541 RINLQ6ZS11 566 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 SLC5A8Q8N695 610 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 RBM15BQ8NDT2 890 aaKnown RBP16.98■□□□□ 0.31
RFFL-211ENST00000584541 C17orf47Q8NEP4 570 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 MIPOL1Q8TD10 442 aa16.98■□□□□ 0.31
RFFL-211ENST00000584541 TP53INP1Q96A56 240 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms