RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 OR4K14Q8NGD5 310 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 CTHRC1Q96CG8 243 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 TMCO6Q96DC7 493 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 OMA1Q96E52 524 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 PGM2Q96G03 612 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 SFXN2Q96NB2 322 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 MCMBPQ9BTE3 642 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 G6PC3Q9BUM1 346 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 NXF5Q9H1B4 397 aaKnown RBP12.11□□□□□ -0.47
COPS3-218ENST00000584216 CAB39LQ9H9S4 337 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 GALNT9Q9HCQ5 603 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 PSD3Q9NYI0 1048 aa12.11□□□□□ -0.47
COPS3-218ENST00000584216 GOLGA6L10A6NI86 522 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 SLC22A20A6NK97 555 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 SUPT3HB4E1H0 165 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 H0YIV9 168 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 PHGDHO43175 533 aaKnown RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 UGDHO60701 494 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 ABCB7O75027 752 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 SUPT3HO75486 399 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 EEDO75530 441 aaKnown RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 TP53P04637 393 aaPredicted RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 ZNF708P17019 499 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 IVDP26440 423 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 BSGP35613 385 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 EEFSECP57772 596 aaKnown RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 RAB10P61026 200 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 PDIA2Q13087 525 aaKnown RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 HEPHL1Q6MZM0 1159 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 MILR1Q7Z6M3 343 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 PLCZ1Q86YW0 608 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 RDH11Q8TC12 318 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 HGDQ93099 445 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 STARD4Q96DR4 205 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 LCORQ96JN0 433 aaPredicted RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 UBXN10Q96LJ8 280 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 ZNF717Q9BY31 904 aaPredicted RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 DDX47Q9H0S4 455 aaKnown RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 ALG9Q9H6U8 611 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 DKKL1Q9UK85 242 aa12.1□□□□□ -0.47
COPS3-218ENST00000584216 MTO1Q9Y2Z2 717 aaKnown RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 MRPS18CQ9Y3D5 142 aaKnown RBP12.1□□□□□ -0.47
COPS3-218ENST00000584216 COL6A5A8TX70 2615 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 WASHC1A8K0Z3 465 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 SYCE1LA8MT33 242 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 KERAO60938 352 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 SEMA3DO95025 777 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 TGM6O95932 706 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 CT62P0C5K7 136 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 CPMP14384 443 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 PPP3CBP16298 524 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 PORP16435 677 aaPredicted RBP12.09□□□□□ -0.47
COPS3-218ENST00000584216 XKP51811 444 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 NR1H2P55055 460 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 ATP5J2P56134 94 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 CLDN18P56856 261 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 PSPHP78330 225 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 ZKSCAN8Q15776 578 aaPredicted RBP12.09□□□□□ -0.47
COPS3-218ENST00000584216 ETFDHQ16134 617 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 NNATQ16517 81 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 BEX5Q5H9J7 111 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 HMBOX1Q6NT76 420 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 RNF175Q8N4F7 328 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 TEX9Q8N6V9 391 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 WDSUB1Q8N9V3 476 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 TMEM158Q8WZ71 300 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 ZNF845Q96IR2 970 aaPredicted RBP12.09□□□□□ -0.47
COPS3-218ENST00000584216 NODALQ96S42 347 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 GPR22Q99680 433 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 CPNE1Q99829 537 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 NMRAL1Q9HBL8 299 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 FANCFQ9NPI8 374 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 PRODH2Q9UF12 536 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 BCAP29Q9UHQ4 241 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 PPP2R2CQ9Y2T4 447 aa12.09□□□□□ -0.47
COPS3-218ENST00000584216 FBN1P35555 2871 aaKnown RBP12.08□□□□□ -0.48
COPS3-218ENST00000584216 UQCRHLA0A096LP55 91 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 C2orf72A6NCS6 295 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 LRRC14BA6NHZ5 514 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 FOXE1O00358 373 aaPredicted RBP12.08□□□□□ -0.48
COPS3-218ENST00000584216 PGRMC2O15173 223 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 EMC8O43402 210 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 GUCY1B2O75343 617 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 ALDOAP04075 364 aaKnown RBP12.08□□□□□ -0.48
COPS3-218ENST00000584216 CD8BP10966 210 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 PEPDP12955 493 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 CNTFP26441 200 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 GMPRP36959 345 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 PTGDSP41222 190 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 PIK3CGP48736 1102 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 STARP49675 285 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 HMGCS1Q01581 520 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 VWA1Q6PCB0 445 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 ZNF474Q6S9Z5 364 aaPredicted RBP12.08□□□□□ -0.48
COPS3-218ENST00000584216 PLXDC2Q6UX71 529 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 RAPH1Q70E73 1250 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 PAGE2Q7Z2X7 111 aa12.08□□□□□ -0.48
COPS3-218ENST00000584216 TBC1D1Q86TI0 1168 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms