RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 NOP14P78316 857 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 SPP2Q13103 211 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 ANKRD55Q3KP44 614 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 LRIT3Q3SXY7 679 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 TCHHL1Q5QJ38 904 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 LIPKQ5VXJ0 399 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 WDR25Q64LD2 544 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 PAQR6Q6TCH4 344 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 ATRAIDQ6UW56 229 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 ABRAXAS1Q6UWZ7 409 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 STOX1Q6ZVD7 989 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 P4HA3Q7Z4N8 544 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 ABHD12Q8N2K0 398 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 Q8N377 158 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 TEX9Q8N6V9 391 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 BCORP1Q8N888 145 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 WDR36Q8NI36 951 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 C16orf45Q96MC5 204 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 VGLL1Q99990 258 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 FICDQ9BVA6 458 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 RWDD1Q9H446 243 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 HEXA-AS1Q9H8Q6 139 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 ECT2Q9H8V3 914 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 VAT1LQ9HCJ6 419 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 AMBNQ9NP70 447 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 ABCC13Q9NSE7 274 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 ANKMY1Q9P2S6 941 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 PURGQ9UJV8 347 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 ISY1Q9ULR0 285 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 MGAT4BQ9UQ53 548 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 DHRS7Q9Y394 339 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 FBXO7Q9Y3I1 522 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 SYNJ2O15056 1496 aa3.01□□□□□ -1.93
SMCHD1-209ENST00000583441 NPIPA2E9PIF3 369 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 E9PQ18 207 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 F8WDY8 70 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 H3BTX0 84 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 PDXKO00764 312 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 TOM1L1O75674 476 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 ECDO95905 644 aaPredicted RBP3□□□□□ -1.93
SMCHD1-209ENST00000583441 HCKP08631 526 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 IL4RP24394 825 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 MTTPP55157 894 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 PPIAP62937 165 aaKnown RBP3□□□□□ -1.93
SMCHD1-209ENST00000583441 HSF2Q03933 536 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 SRYQ05066 204 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 PDZK1IP1Q13113 114 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 C9orf66Q5T8R8 295 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 TAF3Q5VWG9 929 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 ARMCX5Q6P1M9 558 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 EMBQ6PCB8 327 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 ZNF841Q6ZN19 808 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 GET4Q7L5D6 327 aaPredicted RBP3□□□□□ -1.93
SMCHD1-209ENST00000583441 MISPQ8IVT2 679 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 CENPSQ8N2Z9 138 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 RELL2Q8NC24 303 aaPredicted RBP3□□□□□ -1.93
SMCHD1-209ENST00000583441 ZNRF1Q8ND25 227 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 C17orf47Q8NEP4 570 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 FLVCR1-AS1Q8TAF5 88 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 GIPC3Q8TF64 312 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 RASL10AQ92737 203 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 BIRC7Q96CA5 298 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 SLC25A36Q96CQ1 311 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 GPA33Q99795 319 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 FAM173AQ9BQD7 235 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 ST6GALNAC5Q9BVH7 336 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 TRIM6Q9C030 488 aaPredicted RBP3□□□□□ -1.93
SMCHD1-209ENST00000583441 NRN1Q9NPD7 142 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 FZR1Q9UM11 496 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 FKBP7Q9Y680 259 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 RAD54L2Q9Y4B4 1467 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 NCAPD2Q15021 1401 aa3□□□□□ -1.93
SMCHD1-209ENST00000583441 IGHV3-16A0A0C4DH30 117 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 A0A1B0GTH9 108 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 RGSL1A5PLK6 1076 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 LRIT2A6NDA9 550 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 FBLL1A6NHQ2 334 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 ANKRD30BLA7E2S9 258 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 PDLIM1O00151 329 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 MCF2LO15068 1137 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 ADAM12O43184 909 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 NOL3O60936 208 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 SCGB2A1O75556 95 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 PDE5AO76074 875 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 AKR7A3O95154 331 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 GOT2P00505 430 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 MT-ND1P03886 318 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 TNNI3P19429 210 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 UCP1P25874 307 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 DPP4P27487 766 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 ETV5P41161 510 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 RPL34P49207 117 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 PGFP49763 221 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 PRKCEQ02156 737 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 CEBPEQ15744 281 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 CCL14Q16627 93 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 PCK2Q16822 640 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 ZNF699Q32M78 642 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 ZNF506Q5JVG8 444 aa2.99□□□□□ -1.93
SMCHD1-209ENST00000583441 LINC00242Q5T6M2 205 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms