RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 RPL14P50914 215 aaKnown RBP11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 SLC18A1P54219 525 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 FBXW4P57775 412 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 KCNJ2P63252 427 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 RPS6KA2Q15349 733 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 NTRK2Q16620 822 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 KRTCAP3Q53RY4 240 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 C6orf136Q5SQH8 315 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 AGBL2Q5U5Z8 902 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 IL23RQ5VWK5 629 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 TMEM107Q6UX40 140 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 CLEC18BQ6UXF7 455 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 HDXQ7Z353 690 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 SIAH3Q8IW03 269 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 KIRREL3Q8IZU9 778 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 GOLGA6L1Q8N7Z2 621 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 ZFP62Q8NB50 900 aaPredicted RBP11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 CLEC18CQ8NCF0 446 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 C17orf47Q8NEP4 570 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 OR7G2Q8NG99 324 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 PAQR8Q8TEZ7 354 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 ARL8AQ96BM9 186 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 ERP27Q96DN0 273 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 MAGED4Q96JG8 741 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 LCORQ96JN0 433 aaPredicted RBP11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 AMDHD1Q96NU7 426 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 SORT1Q99523 831 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 DDX18Q9NVP1 670 aaKnown RBP11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 SLC5A6Q9Y289 635 aa11.61□□□□□ -0.55
SMARCE1-218ENST00000582955 TRGV8A0A0C4DH27 118 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 CDC40O60508 579 aaKnown RBP eCLIP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 PLOD3O60568 738 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 COQ9O75208 318 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 NME6O75414 186 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 SLITRK5O94991 958 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 PRPS2P11908 318 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 DDX5P17844 614 aaKnown RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 ABCD3P28288 659 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 GPC1P35052 558 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 PPICP45877 212 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 DCAF7P61962 342 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 PPIAP62937 165 aaKnown RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 HSF1Q00613 529 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 PLCXD2Q0VAA5 305 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 ZNF155Q12901 538 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 HSPB3Q12988 150 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 ZNF385BQ569K4 471 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 C1QL3Q5VWW1 255 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 ATG16L1Q676U5 607 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 R3HCC1LQ7Z5L2 792 aaKnown RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 TRIM42Q8IWZ5 723 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 GHDCQ8N2G8 530 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 FBXW8Q8N3Y1 598 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 ZFP28Q8NHY6 868 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 DIO2Q92813 273 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 CIDECQ96AQ7 238 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 HSPBAP1Q96EW2 488 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 ZNF764Q96H86 408 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 TTTY12Q9BZ98 90 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 FOLH1BQ9HBA9 442 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 SH2D2AQ9NP31 389 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 PNPOQ9NVS9 261 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 TUBA8Q9NY65 449 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 TAS2R9Q9NYW1 312 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 CNIH4Q9P003 139 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 SH3BGRL2Q9UJC5 107 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 ERRFI1Q9UJM3 462 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 EIF3LQ9Y262 564 aaKnown RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 CHCHD2Q9Y6H1 151 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 FLNCQ14315 2725 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 ZGRF1Q86YA3 2104 aa11.6□□□□□ -0.55
SMARCE1-218ENST00000582955 A0A087WV62 115 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 FRG2CA6NGY1 282 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 SCAMP2O15127 329 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 ACOX3O15254 700 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 LRRTM2O43300 516 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 SLC19A2O60779 497 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 TBX19O60806 448 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 ERN1O75460 977 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 PPM1BO75688 479 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 STSP08842 583 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 H2AFXP16104 143 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 DRD5P21918 477 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 RPL3P39023 403 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 MANFP55145 182 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 CASP6P55212 293 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 RPP38P78345 283 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 MAD2L1Q13257 205 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 PDE7AQ13946 482 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 PTGR1Q14914 329 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 C4orf17Q53FE4 359 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 CMPK2Q5EBM0 449 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 ZNF551Q7Z340 670 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 SLC22A16Q86VW1 577 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 SSC4DQ8WTU2 575 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 MTERF3Q96E29 417 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 OMA1Q96E52 524 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 ZBED6CLQ96FA7 236 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 ATP6V1G3Q96LB4 118 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 JSRP1Q96MG2 331 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms