RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 DNAJC5GQ8N7S2 189 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 FLCNQ8NFG4 579 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 OR9A2Q8NGT5 310 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 KAT2AQ92830 837 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 GABRG3Q99928 467 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 MAPKAP1Q9BPZ7 522 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 UCK2Q9BZX2 261 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 MMP27Q9H306 513 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 EHD3Q9NZN3 535 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 CLEC1BQ9P126 229 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 ENOPH1Q9UHY7 261 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 CAB39Q9Y376 341 aaPredicted RBP12.88□□□□□ -0.35
SRSF1-205ENST00000582730 ASB4Q9Y574 426 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 PCDHGA3Q9Y5H0 932 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 HEBP2Q9Y5Z4 205 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 LOC100506127A0A0U1RQW1 187 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 METTL15A6NJ78 407 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 TAF4O00268 1085 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 IDH3BO43837 385 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 MC3RP41968 323 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 HMGA2P52926 109 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 SPATC1Q76KD6 591 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 COMTD1Q86VU5 262 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 DENND6BQ8NEG7 585 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 B3GNT7Q8NFL0 401 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 RASSF5Q8WWW0 418 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 RIPOR3Q96MK2 946 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 FNDC11Q9BVV2 318 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 ANKHQ9HCJ1 492 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 TAS2R7Q9NYW3 318 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 SNX7Q9UNH6 387 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 KNL1Q8NG31 2342 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 TICRRQ7Z2Z1 1910 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.88□□□□□ -0.35
SRSF1-205ENST00000582730 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.88□□□□□ -0.35
SRSF1-205ENST00000582730 AIREO43918 545 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 PTTG1O95997 202 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 TNNI3P19429 210 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 CSNK2A2P19784 350 aaPredicted RBP12.88□□□□□ -0.35
SRSF1-205ENST00000582730 AHRP35869 848 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 STXBP1P61764 594 aaKnown RBP12.88□□□□□ -0.35
SRSF1-205ENST00000582730 LTB4RQ15722 352 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 PRRT3Q5FWE3 981 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 SLX4IPQ5VYV7 408 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 CELF2-AS1Q8N7Q2 184 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 ZNF675Q8TD23 568 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 PIAS3Q9Y6X2 628 aa12.88□□□□□ -0.35
SRSF1-205ENST00000582730 CLDN24A6NM45 220 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 PRICKLE3O43900 615 aaPredicted RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 KCNJ13O60928 360 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 KRT8P05787 483 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 CHRM4P08173 479 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 MED22Q15528 200 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 BHLHB9Q6PI77 547 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 MEX3DQ86XN8 651 aaKnown RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 TRIM48Q8IWZ4 208 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 CACTIN-AS1Q8N1I8 211 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 SRFBP1Q8NEF9 429 aaKnown RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 APOBEC4Q8WW27 367 aaKnown RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 WDR92Q96MX6 357 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 POLR2J3Q9H1A7 115 aaKnown RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 CLN6Q9NWW5 311 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 ZNF624Q9P2J8 865 aaPredicted RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 KCND3Q9UK17 655 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 SLC13A4Q9UKG4 626 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 SLC9A8Q9Y2E8 581 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 KCNE3Q9Y6H6 103 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 ZNF780BQ9Y6R6 833 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 MDC1Q14676 2089 aaKnown RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 PTHP01270 115 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 ZNF888P0CJ79 500 aaPredicted RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 DBTP11182 482 aaKnown RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 ALOX12P18054 663 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 POLR2CP19387 275 aaPredicted RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 ANXA11P50995 505 aaKnown RBP12.87□□□□□ -0.35
SRSF1-205ENST00000582730 NFATC4Q14934 902 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 MFSD9Q8NBP5 474 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 SUN3Q8TAQ9 357 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 SLC7A13Q8TCU3 470 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 DOK4Q8TEW6 326 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 FCGR1BQ92637 280 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 SLC38A4Q969I6 547 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 MRGPRX1Q96LB2 322 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 PRR14Q9BWN1 585 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 ZSCAN32Q9NX65 697 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 DNAJC27Q9NZQ0 273 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 FTSJ1Q9UET6 329 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 N6AMT1Q9Y5N5 214 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 BRWD1Q9NSI6 2320 aa12.87□□□□□ -0.35
SRSF1-205ENST00000582730 TLR4O00206 839 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 FRS3O43559 492 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 MRPS14O60783 128 aaKnown RBP12.86□□□□□ -0.35
SRSF1-205ENST00000582730 ADAP00813 363 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 GADD45AP24522 165 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 ARPC4P59998 168 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 PRR5P85299 388 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 TGM3Q08188 693 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 TBCEQ15813 527 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms