RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	SGO1	Q5FBB7	561 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PAGE2B	Q5JRK9	111 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EXOSC6	Q5RKV6	272 aa	Known RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CES4A	Q5XG92	561 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FRG2	Q64ET8	278 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR52E8	Q6IFG1	317 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RNF111	Q6ZNA4	994 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACAD11	Q709F0	780 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CHSY3	Q70JA7	882 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZAR1	Q86SH2	424 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CCDC25	Q86WR0	208 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	C1orf52	Q8N6N3	182 aa	Known RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM13C	Q8NE31	585 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	C17orf47	Q8NEP4	570 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR7G2	Q8NG99	324 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR5L2	Q8NGL0	311 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PPP1R14C	Q8TAE6	165 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	UHMK1	Q8TAS1	419 aa	Known RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HOXB13	Q92826	284 aa	Predicted RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ARSG	Q96EG1	525 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	APIP	Q96GX9	242 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM41A	Q96HV5	264 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM237	Q96Q45	408 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HS3ST6	Q96QI5	342 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FRG2B	Q96QU4	278 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	UCN2	Q96RP3	112 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CCDC77	Q9BR77	488 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF559	Q9BR84	538 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR2B2	Q9GZK3	357 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ROGDI	Q9GZN7	287 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GSTO2	Q9H4Y5	243 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACTR8	Q9H981	624 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SERHL	Q9NQF3	203 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LYAR	Q9NX58	379 aa	Known RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DNAJB12	Q9NXW2	375 aa	Known RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	COQ3	Q9NZJ6	369 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CNIH4	Q9P003	139 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CPSF2	Q9P2I0	782 aa	Known RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PHF11	Q9UIL8	331 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ADAM29	Q9UKF5	820 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACAD8	Q9UKU7	415 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MRPS33	Q9Y291	106 aa	Known RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PCDHGA11	Q9Y5H2	935 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PTGDR2	Q9Y5Y4	395 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	USF3	Q68DE3	2245 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	STAB1	Q9NY15	2570 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CAD	P27708	2225 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329		A0A088AWK7	358 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	C2orf92	A0A1B0GVN3	265 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329		A0A1W2PPM1	405 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR6C76	A6NM76	312 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FIGNL2	A6NMB9	653 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	AHRR	A9YTQ3	701 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TRIM49D1	C9J1S8	452 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACOT7	O00154	380 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EFNA2	O43921	213 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FADS1	O60427	444 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ERAL1	O75616	437 aa	Known RBP	4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CLDN9	O95484	217 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	THBD	P07204	575 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	IL3	P08700	152 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GFAP	P14136	432 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CPN1	P15169	458 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	POR	P16435	677 aa	Predicted RBP	4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF708	P17019	499 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF10	P21506	573 aa	Predicted RBP	4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DRD5	P21918	477 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PSMA4	P25789	261 aa	Known RBP	4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GDF1	P27539	372 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	STX2	P32856	288 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PAFAH1B1	P43034	410 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KIR2DL2	P43627	348 aa	Predicted RBP	4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC6A8	P48029	635 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SERPINB8	P50452	374 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ASCL1	P50553	236 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC12A2	P55011	1212 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CALCOCO2	Q13137	446 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KIAA0040	Q15053	153 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FLYWCH1	Q4VC44	716 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF385B	Q569K4	471 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF678	Q5SXM1	525 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	WLS	Q5T9L3	541 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HIST2H2AA3	Q6FI13	130 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR5M10	Q6IEU7	315 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	METTL2B	Q6P1Q9	378 aa	Known RBP	4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	VWA1	Q6PCB0	445 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SCIMP	Q6UWF3	145 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SEZ6L2	Q6UXD5	910 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ANGPTL8	Q6UXH0	198 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PAMR1	Q6UXH9	720 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TIFAB	Q6ZNK6	161 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RAPH1	Q70E73	1250 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM200A	Q86VY9	491 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NUDT13	Q86X67	352 aa		4.03	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PRIMA1	Q86XR5	153 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms