RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 VN1R1Q9GZP7 353 aa7.49□□□□□ -1.21
COPS3-215ENST00000578317 FOXJ2Q9P0K8 574 aa7.49□□□□□ -1.21
COPS3-215ENST00000578317 SLAMF8Q9P0V8 285 aa7.49□□□□□ -1.21
COPS3-215ENST00000578317 CTSFQ9UBX1 484 aa7.49□□□□□ -1.21
COPS3-215ENST00000578317 AP3M1Q9Y2T2 418 aa7.49□□□□□ -1.21
COPS3-215ENST00000578317 SPTBP11277 2137 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 A0A1W2PQ72 361 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 FAM181BA6NEQ2 426 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 IDSB3KWA1 339 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 FXYD1O00168 92 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 CNOT3O75175 753 aaKnown RBP7.48□□□□□ -1.21
COPS3-215ENST00000578317 CDC123O75794 336 aaPredicted RBP7.48□□□□□ -1.21
COPS3-215ENST00000578317 C6orf47O95873 294 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 ABCB1P08183 1280 aaPredicted RBP7.48□□□□□ -1.21
COPS3-215ENST00000578317 UQCRC2P22695 453 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 NCBP2P52298 156 aaKnown RBP eCLIP7.48□□□□□ -1.21
COPS3-215ENST00000578317 EMP2P54851 167 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 SUMO1P63165 101 aaKnown RBP7.48□□□□□ -1.21
COPS3-215ENST00000578317 MGAT2Q10469 447 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 NFYCQ13952 458 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 NSDHLQ15738 373 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 SPATS1Q496A3 300 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 RUNDC3AQ59EK9 446 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 C6orf10Q5SRN2 563 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 FAM199XQ6PEV8 388 aaPredicted RBP7.48□□□□□ -1.21
COPS3-215ENST00000578317 BHLHB9Q6PI77 547 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 TMEM205Q6UW68 189 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 C16orf89Q6UX73 402 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 ZNF621Q6ZSS3 439 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 ASRGL1Q7L266 308 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 ZNF551Q7Z340 670 aaPredicted RBP7.48□□□□□ -1.21
COPS3-215ENST00000578317 ANKRD46Q86W74 232 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 OR4N5Q8IXE1 308 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 CLECL1Q8IZS7 167 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 ARHGAP24Q8N264 748 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 RBM15BQ8NDT2 890 aaKnown RBP7.48□□□□□ -1.21
COPS3-215ENST00000578317 BVESQ8NE79 360 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 OR8J3Q8NGG0 315 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 OR2Y1Q8NGV0 311 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 MOAP1Q96BY2 351 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 ELP4Q96EB1 424 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 ANKRD27Q96NW4 1050 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 CGREF1Q99674 301 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 INPP5KQ9BT40 448 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 MMADHCQ9H3L0 296 aaPredicted RBP7.48□□□□□ -1.21
COPS3-215ENST00000578317 CXorf21Q9HAI6 301 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 NECTIN3Q9NQS3 549 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 THSD1Q9NS62 852 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 SEMA3GQ9NS98 782 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 VAPAQ9P0L0 249 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 PTGFRNQ9P2B2 879 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 ZNF639Q9UID6 485 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 CROTQ9UKG9 612 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 FARSAQ9Y285 508 aaKnown RBP7.48□□□□□ -1.21
COPS3-215ENST00000578317 PCDHGA6Q9Y5G7 932 aa7.48□□□□□ -1.21
COPS3-215ENST00000578317 C15orf38-AP3S2A0A0A6YYH1 394 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.47□□□□□ -1.21
COPS3-215ENST00000578317 A0A1W2PS29 197 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 TRABD2BA6NFA1 517 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 OR2W5A6NFC9 320 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 GYG2O15488 501 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 RAD1O60671 282 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 ALOX12BO75342 701 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 SOX30O94993 753 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 CPSF4O95639 269 aaKnown RBP7.47□□□□□ -1.21
COPS3-215ENST00000578317 IGHEP01854 428 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 HEXBP07686 556 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 C8orf89P0DMQ9 161 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 TCN2P20062 427 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 CD247P20963 164 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 MAOAP21397 527 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 S1PR1P21453 382 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 PPIBP23284 216 aaKnown RBP7.47□□□□□ -1.21
COPS3-215ENST00000578317 SLC6A2P23975 617 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 STAT5AP42229 794 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 CDKN2CP42773 168 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 CPA2P48052 419 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 NUDT2P50583 147 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 EFNA3P52797 238 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 RPS15P62841 145 aaKnown RBP7.47□□□□□ -1.21
COPS3-215ENST00000578317 TXNL4AP83876 142 aaKnown RBP7.47□□□□□ -1.21
COPS3-215ENST00000578317 PLIN5Q00G26 463 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 DUSP2Q05923 314 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 ELAVL1Q15717 326 aaKnown RBP7.47□□□□□ -1.21
COPS3-215ENST00000578317 PRICKLE4Q2TBC4 344 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 ZNF750Q32MQ0 723 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 MINDY4Q4G0A6 757 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 DNAL1Q4LDG9 190 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 ZNF628Q5EBL2 1059 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 NANOGP8Q6NSW7 305 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 FAM180BQ6P0A1 224 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 ARPINQ7Z6K5 226 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 DHDDSQ86SQ9 333 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 MARCH9Q86YJ5 346 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 MSRB3Q8IXL7 192 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 PGAM4Q8N0Y7 254 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 OR2L13Q8N349 312 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 OR4A15Q8NGL6 344 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 SFXN5Q8TD22 340 aa7.47□□□□□ -1.21
COPS3-215ENST00000578317 ZFP90Q8TF47 636 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms