RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 IGHV3-16A0A0C4DH30 117 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 OOEPA6NGQ2 149 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 RPL37AP8A6NKH3 93 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 H0YIG0 161 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 L7N2F9 121 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 OGTO15294 1046 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 TOP1P11387 765 aaKnown RBP4.1□□□□□ -1.75
NUP88-213ENST00000576862 RDXP35241 583 aaKnown RBP4.1□□□□□ -1.75
NUP88-213ENST00000576862 ACAA2P42765 397 aaKnown RBP4.1□□□□□ -1.75
NUP88-213ENST00000576862 NOVP48745 357 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 HNMTP50135 292 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 SLC12A3P55017 1021 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 GMFBP60983 142 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 ACTN3Q08043 901 aaPredicted RBP4.1□□□□□ -1.75
NUP88-213ENST00000576862 IQCCQ4KMZ1 466 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 BEND3Q5T5X7 828 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 ZNF776Q68DI1 518 aaPredicted RBP4.1□□□□□ -1.75
NUP88-213ENST00000576862 REG3GQ6UW15 175 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 RGS9BPQ6ZS82 235 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 PIWIL3Q7Z3Z3 882 aaKnown RBP4.1□□□□□ -1.75
NUP88-213ENST00000576862 CEACAM19Q7Z692 300 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 FGFRL1Q8N441 504 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 LIPHQ8WWY8 451 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 SEPT8Q92599 483 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 KRT35Q92764 455 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 C17orf62Q9BQA9 187 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 SLC39A3Q9BRY0 314 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 FUT8Q9BYC5 575 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 LRRCC1Q9C099 1032 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 STRADBQ9C0K7 418 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 SLC7A5P2Q9GIP4 190 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 IQCGQ9H095 443 aaKnown RBP4.1□□□□□ -1.75
NUP88-213ENST00000576862 STMN4Q9H169 189 aaPredicted RBP4.1□□□□□ -1.75
NUP88-213ENST00000576862 THAP9Q9H5L6 903 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 SRD5A3Q9H8P0 318 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 PLEKHA3Q9HB20 300 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 TM9SF3Q9HD45 589 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 TUFT1Q9NNX1 390 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 MID1IP1Q9NPA3 183 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 DEPPQ9NTK1 212 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 PRR34Q9NV39 138 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 COX16Q9P0S2 106 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 SALL1Q9NSC2 1324 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 NHSL1Q5SYE7 1610 aa4.1□□□□□ -1.75
NUP88-213ENST00000576862 LTN1O94822 1766 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 ARPC4-TTLL3A0A0A6YYG9 625 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 A0A0U1RQK1 487 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 RNF103-CHMP3A0A140T963 221 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 ZNF320A2RRD8 509 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 CCDC162PA2VCL2 907 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 RGSL1A5PLK6 1076 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 K7EPI3 171 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 TOM1O60784 492 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 KINO60870 393 aaKnown RBP4.09□□□□□ -1.75
NUP88-213ENST00000576862 GRAP2O75791 330 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 PAHP00439 452 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 RENP00797 406 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 IGHG1P01857 330 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 ACKR3P25106 362 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 GJB2P29033 226 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 SOX6P35712 828 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 ATP5OP48047 213 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 ETV1P50549 477 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 GBE1Q04446 702 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 SMU1Q2TAY7 513 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 POM121L1PQ3SYA9 428 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 EIPR1Q53HC9 387 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 NHSL2Q5HYW2 709 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 NEPROQ6NW34 567 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 OLFM4Q6UX06 510 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 SIGLEC15Q6ZMC9 328 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 MARCH9Q86YJ5 346 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 AQP12AQ8IXF9 295 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 TTC5Q8N0Z6 440 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 RTL3Q8N8U3 475 aaKnown RBP4.09□□□□□ -1.75
NUP88-213ENST00000576862 SPERTQ8NA61 448 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 ATAD1Q8NBU5 361 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 C8orf46Q8TAG6 207 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 GPR148Q8TDV2 347 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 RFT1Q96AA3 541 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 TUBGCP3Q96CW5 907 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 EPSTI1Q96J88 318 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 TNFRSF13CQ96RJ3 184 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 PSMB7Q99436 277 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 DCTPP1Q9H773 170 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 NMRK1Q9NWW6 199 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 HYPKQ9NX55 129 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 GPR83Q9NYM4 423 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 ARMCX3Q9UH62 379 aaPredicted RBP4.09□□□□□ -1.75
NUP88-213ENST00000576862 IL19Q9UHD0 177 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 TEKT2Q9UIF3 430 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 CHTOPQ9Y3Y2 248 aaKnown RBP4.09□□□□□ -1.75
NUP88-213ENST00000576862 USP16Q9Y5T5 823 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 MROH5Q6ZUA9 1318 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 TNS2Q63HR2 1409 aa4.09□□□□□ -1.75
NUP88-213ENST00000576862 ADAMTS7Q9UKP4 1686 aa4.09□□□□□ -1.76
NUP88-213ENST00000576862 PXDNLA1KZ92 1463 aa4.08□□□□□ -1.76
NUP88-213ENST00000576862 ZNF840PA6NDX5 716 aa4.08□□□□□ -1.76
NUP88-213ENST00000576862 RNF113AO15541 343 aaKnown RBP4.08□□□□□ -1.76
NUP88-213ENST00000576862 SPOPO43791 374 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms