RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 NLGN4XQ8N0W4 816 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF419Q96HQ0 510 aaPredicted RBP12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 SYNDIG1Q9H7V2 258 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 GALNT9Q9HCQ5 603 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 ALS2Q96Q42 1657 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 TRBV2A0A0J9YWF9 115 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 A0A1B0GVT2 93 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 UNC119BA6NIH7 251 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 POLR1CO15160 346 aaPredicted RBP12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 CXCL14O95715 111 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 HLA-EP13747 358 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 RGRP47804 291 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 CLCNKAP51800 687 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 MC1RQ01726 317 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 SLC14A2Q15849 920 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 FBXO42Q6P3S6 717 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 KLHL24Q6TFL4 600 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 DCUN1D3Q8IWE4 304 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 CELF5Q8N6W0 485 aaKnown RBP12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 HSPA12BQ96MM6 686 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 BRF2Q9HAW0 419 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR6C2Q9NZP2 312 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 MEMO1Q9Y316 297 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 Q9Y3F1 56 aa12.47□□□□□ -0.41
PCDHGB3-201ENST00000576222 DRGXA6NNA5 263 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 PRAF2O60831 178 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 LDOC1O95751 146 aaPredicted RBP12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 RENP00797 406 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 GASTP01350 101 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 AGTR1P30556 359 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 VSX2P58304 361 aaPredicted RBP12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 TRIM46Q7Z4K8 759 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 LRRC28Q86X40 367 aaPredicted RBP12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 CPOQ8IVL8 374 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 SH3RF2Q8TEC5 729 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 CASTOR1Q8WTX7 329 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 SPRYD4Q8WW59 207 aaPredicted RBP12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 CNOT9Q92600 299 aaKnown RBP12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 MTIF3Q9H2K0 278 aaKnown RBP12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 NTN4Q9HB63 628 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 B3GNT2Q9NY97 397 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 KLHL9Q9P2J3 617 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 FBXL3Q9UKT7 428 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 FARSAQ9Y285 508 aaKnown RBP12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 DDX60LQ5H9U9 1706 aaKnown RBP12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 ANKRD36CQ5JPF3 1778 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 SMLR1H3BR10 107 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 M0R036 132 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 ETV3P41162 512 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 GIPRP48546 466 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 RAB2AP61019 212 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 MAP4K2Q12851 820 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 ODF4Q2M2E3 257 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 BEST3Q8N1M1 668 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 RNF175Q8N4F7 328 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 POGLUT1Q8NBL1 392 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 C3orf58Q8NDZ4 430 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 FATE1Q969F0 183 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 RAB11FIP5Q9BXF6 653 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 LIPT1Q9Y234 373 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 NUP205Q92621 2012 aa12.46□□□□□ -0.41
PCDHGB3-201ENST00000576222 FZD9O00144 591 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 PPM1AP35813 382 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 NAA10P41227 235 aaPredicted RBP12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 TAGLNQ01995 201 aaKnown RBP12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 PUM1Q14671 1186 aaKnown RBP eCLIP12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZCCHC12Q6PEW1 402 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 KCTD9Q7L273 389 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 TMEM145Q8NBT3 493 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 GLYATL1Q969I3 302 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 NIPSNAP1Q9BPW8 284 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 AIFM2Q9BRQ8 373 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 CNIH4Q9P003 139 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 RASD1Q9Y272 281 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 CCL16O15467 120 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLC10A3P09131 477 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR3A2P47893 321 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 CTBP2P56545 445 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 BTN3A2P78410 334 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 AIMP2Q13155 320 aaKnown RBP12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 FCN2Q15485 313 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 PLK5Q496M5 336 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 NXPE4Q6UWF7 544 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 RFPL4BQ6ZWI9 263 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 PGBD5Q8N414 524 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR8K3Q8NH51 312 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 LMLNQ96KR4 655 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 ALG8Q9BVK2 526 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 IL36AQ9UHA7 158 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 PRSS21Q9Y6M0 314 aa12.46□□□□□ -0.42
PCDHGB3-201ENST00000576222 HOXC11O43248 304 aaPredicted RBP12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 PAK4O96013 591 aaPredicted RBP12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 CLEC2LP0C7M8 214 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 GNSP15586 552 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 ADH7P40394 386 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 STK19P49842 368 aaPredicted RBP12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 MOAP1Q96BY2 351 aa12.45□□□□□ -0.42
PCDHGB3-201ENST00000576222 METTL2AQ96IZ6 378 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms