RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SERTAD2Q14140 314 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 HEPACAMQ14CZ8 416 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 MAPRE2Q15555 327 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 PDCD4Q53EL6 469 aaKnown RBP7.32□□□□□ -1.24
CCDC40-215ENST00000576033 CRB2Q5IJ48 1285 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 FHL5Q5TD97 284 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 NXNQ6DKJ4 435 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 H3F3CQ6NXT2 135 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 JMJD6Q6NYC1 403 aaPredicted RBP7.32□□□□□ -1.24
CCDC40-215ENST00000576033 IGFL2Q6UWQ7 119 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 ISLR2Q6UXK2 745 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 NPSR1Q6W5P4 371 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 RNF111Q6ZNA4 994 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 MDGA2Q7Z553 956 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 GALNT10Q86SR1 603 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 ANKRD46Q86W74 232 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 PGAM4Q8N0Y7 254 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 VWA5B2Q8N398 1253 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 OR5AK3PQ8NH89 298 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 C16orf52Q8NHV5 167 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 FBXL20Q96IG2 436 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 AMDHD1Q96NU7 426 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 FAIM2Q9BWQ8 316 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 DEFB126Q9BYW3 111 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 WWTR1Q9GZV5 400 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 REEP4Q9H6H4 257 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 EQTNQ9NQ60 294 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 SIRT3Q9NTG7 399 aaPredicted RBP7.32□□□□□ -1.24
CCDC40-215ENST00000576033 ZIM2Q9NZV7 527 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 SLC7A8Q9UHI5 535 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 TUBD1Q9UJT1 453 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 PRPF19Q9UMS4 504 aaKnown RBP7.32□□□□□ -1.24
CCDC40-215ENST00000576033 PPIEQ9UNP9 301 aaKnown RBP7.32□□□□□ -1.24
CCDC40-215ENST00000576033 ERVK-11Q9UQG0 969 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 ENTPD4Q9Y227 616 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 ZNF451Q9Y4E5 1061 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 NBASA2RRP1 2371 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 LOC100653049A0A140TA62 436 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 MYO1GB0I1T2 1018 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 PDPK1O15530 556 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 UTP20O75691 2785 aaKnown RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 KRT34O76011 436 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 NEURL1O76050 574 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 C6orf47O95873 294 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 ABCB1P08183 1280 aaPredicted RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 SNRPB2P08579 225 aaKnown RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 COX7A2P14406 83 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 DRD2P14416 443 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 CSNK2A2P19784 350 aaPredicted RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 HPCAL1P37235 193 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 CD96P40200 585 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 RNF144AP50876 292 aaPredicted RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 DGKQP52824 942 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 CASP9P55211 416 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 WNT3P56703 355 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 GPR85P60893 370 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 ACTR3P61158 418 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 EMX2Q04743 252 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 GAB1Q13480 694 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 RCAN2Q14206 197 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 OR1C1Q15619 314 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 CEBPEQ15744 281 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 SNCBQ16143 134 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 IGFBP7Q16270 282 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 TRMT5Q32P41 509 aaKnown RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 SPANXN4Q5MJ08 99 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 ABHD17BQ5VST6 288 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 IRAK1BP1Q5VVH5 260 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 BICRALQ6AI39 1079 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 OR4F3Q6IEY1 312 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 PAOXQ6QHF9 649 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 BLOC1S3Q6QNY0 202 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 C16orf89Q6UX73 402 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 LYPD8Q6UX82 237 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 HSDL2Q6YN16 418 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 GK5Q6ZS86 529 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 Q6ZS92 163 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 IKBIPQ70UQ0 350 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 OLIG3Q7RTU3 272 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 SZRD1Q7Z422 152 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 NET1Q7Z628 596 aaPredicted RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 RPS19BP1Q86WX3 136 aaKnown RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 RIMKLAQ8IXN7 391 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 FAM9CQ8IZT9 166 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 MIER2Q8N344 545 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 ZNF441Q8N8Z8 693 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 MORN4Q8NDC4 146 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 MDS2Q8NDY4 140 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 OR4N2Q8NGD1 307 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 OR5M3Q8NGP4 307 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 WDR60Q8WVS4 1066 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 DAZLQ92904 295 aaKnown RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 MCUR1Q96AQ8 359 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 PPCDCQ96CD2 204 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 RCN3Q96D15 328 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 RBM18Q96H35 190 aaKnown RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 BBS4Q96RK4 519 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 RASL10BQ96S79 203 aa7.31□□□□□ -1.24
CCDC40-215ENST00000576033 GPATCH1Q9BRR8 931 aaKnown RBP7.31□□□□□ -1.24
CCDC40-215ENST00000576033 YIPF4Q9BSR8 244 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms