RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 ZNF44P15621 663 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ABOP16442 354 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 CXCL3P19876 107 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 HNF1AP20823 631 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 CNR1P21554 472 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 C21orf33P30042 268 aaPredicted RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 DNAJA1P31689 397 aaKnown RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 GKP32189 559 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 MC3RP41968 323 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 HCCSP53701 268 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 SLC26A5P58743 744 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 RPL7AP62424 266 aaKnown RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 IRF9Q00978 393 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 TRAM1Q15629 374 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 TSNQ15631 228 aaKnown RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 INPP5JQ15735 1006 aaPredicted RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 MPPED2Q15777 294 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ZNF630Q2M218 657 aaPredicted RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 AKIRIN2Q53H80 203 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 XKR4Q5GH76 650 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ODR4Q5SWX8 454 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 CPZQ66K79 652 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 NADSYN1Q6IA69 706 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 CNIH2Q6PI25 160 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 C1orf186Q6ZWK4 172 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ZNF605Q86T29 641 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 CYP4Z1Q86W10 505 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 TPRA1Q86W33 373 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ANGPTL5Q86XS5 388 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 KIAA0319LQ8IZA0 1049 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 CPXCR1Q8N123 301 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ZNF619Q8N2I2 560 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 SYT14Q8NB59 555 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 DNAAF1Q8NEP3 725 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 BEST4Q8NFU0 473 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 OR10A7Q8NGE5 316 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 OR10K1Q8NGX5 313 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 DNAJB14Q8TBM8 379 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ACOT11Q8WXI4 607 aaPredicted RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 CNOT9Q92600 299 aaKnown RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 TADA1Q96BN2 335 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 MRGPRX4Q96LA9 322 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 MS4A4EQ96PG1 132 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 LMF1Q96S06 567 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 PARK7Q99497 189 aaKnown RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 RHNO1Q9BSD3 238 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 NLNQ9BYT8 704 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ACPTQ9BZG2 426 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 GPR62Q9BZJ7 368 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 TGIF2Q9GZN2 237 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 XYLT2Q9H1B5 865 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ISYNA1Q9NPH2 558 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ENAMQ9NRM1 1142 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 NDUFB11Q9NX14 153 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ZNF629Q9UEG4 869 aaPredicted RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 PLEKHB1Q9UF11 243 aaPredicted RBP7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 IKZF3Q9UKT9 509 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 ARID2Q68CP9 1835 aa7.56□□□□□ -1.2
TOM1L1-220ENST00000575333 G3V3Q6 166 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 CASKO14936 926 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 SIGLEC5O15389 551 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 RDH16O75452 317 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 BEST1O76090 585 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 ENDOD1O94919 500 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 NTSR2O95665 410 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 ALDOCP09972 364 aaKnown RBP7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 ZNF888P0CJ79 500 aaPredicted RBP7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 RD3LP0DJH9 198 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 GAAP10253 952 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 CPN1P15169 458 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 CXCL2P19875 107 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 GIFP27352 417 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 APEX1P27695 318 aaKnown RBP7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 TACR3P29371 465 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 GNA15P30679 374 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 SLC6A4P31645 630 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 MPIP34949 423 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 PCGF2P35227 344 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 GGT2P36268 569 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 CDKN1BP46527 198 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 EVX1P49640 407 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 CCR6P51684 374 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 PRKXP51817 358 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 OGDHQ02218 1023 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 TAP2Q03519 686 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 NPRL3Q12980 569 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 HNRNPA0Q13151 305 aaKnown RBP7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 NAE1Q13564 534 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 IL18Q14116 193 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 SF1Q15637 639 aaKnown RBP7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 EXOC3L2Q2M3D2 409 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 C9orf64Q5T6V5 341 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 RNLSQ5VYX0 342 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 TXNRD3NBQ6F5E7 133 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 LCLAT1Q6UWP7 414 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 ALKAL1Q6UXT8 129 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 ZNF730Q6ZMV8 503 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 MOB3CQ70IA8 216 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 TMUB2Q71RG4 321 aa7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 SLC29A4Q7RTT9 530 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms