RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SLC2A12Q8TD20 617 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 ASB9Q96DX5 294 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 FBXL20Q96IG2 436 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 ZNF578Q96N58 590 aaPredicted RBP22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 NRSN2Q9GZP1 204 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 TCFL5Q9UL49 500 aa22.39■■□□□ 1.17
ATPAF1-213ENST00000574428 ELOVL7A1L3X0 281 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 HMGN4O00479 90 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 BRINP1O60477 761 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 COQ9O75208 318 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 CLPSP04118 112 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 CD63P08962 238 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 NCK1P16333 377 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 HTR1EP28566 365 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 DLSTP36957 453 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 DNASE1L3Q13609 305 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 IGF2-ASQ6U949 168 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 AMER2Q8N7J2 671 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 DAZLQ92904 295 aaKnown RBP22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 ACTRT3Q9BYD9 372 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 FARSAQ9Y285 508 aaKnown RBP22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 AK5Q9Y6K8 562 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 OR12D1P0DN82 309 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 F8A1P23610 371 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 CD82P27701 267 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 PRIM2P49643 509 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 ERFP50548 548 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 ACTR3P61158 418 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 EEF1A2Q05639 463 aaKnown RBP22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 ZNF155Q12901 538 aaPredicted RBP22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 BNIP2Q12982 314 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 CPEB2Q7Z5Q1 589 aaKnown RBP22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 MIPOL1Q8TD10 442 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 OR10A5Q9H207 317 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 C19orf25Q9UFG5 118 aaPredicted RBP22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 KLK13Q9UKR3 277 aa22.38■■□□□ 1.17
ATPAF1-213ENST00000574428 LOC101059948A0A1B0GTJ6 334 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 H0Y3Z8 333 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 ACOT8O14734 319 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 PRAMEF2O60811 474 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 BMP2P12643 396 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 MAN2A2P49641 1150 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 EMDP50402 254 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 RPS15P62841 145 aaKnown RBP22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 ZNF615Q8N8J6 731 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 SLC16A11Q8NCK7 471 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 ZNF721Q8TF20 911 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 SLC9A6Q92581 669 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 NKD1Q969G9 470 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 OR7D2Q96RA2 312 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 SPATA9Q9BWV2 254 aa22.37■■□□□ 1.17
ATPAF1-213ENST00000574428 TERTO14746 1132 aaKnown RBP22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 ARPC2O15144 300 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 KRT36O76013 467 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 DXOO77932 396 aaKnown RBP22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 SEC24DO94855 1032 aaPredicted RBP22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 IGKV3-11P04433 115 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 FLOT2Q14254 428 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 VMACQ2NL98 169 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 PAPD4Q6PIY7 484 aaKnown RBP22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 PTRH1Q86Y79 214 aaKnown RBP22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 LGI4Q8N135 537 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 XAGE5Q8WWM1 108 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 WDR77Q9BQA1 342 aaPredicted RBP22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 DCLRE1BQ9H816 532 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 THSD1Q9NS62 852 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 DTX4Q9Y2E6 619 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 HEMK1Q9Y5R4 338 aaPredicted RBP22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 SNX13Q9Y5W8 968 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 KCNE3Q9Y6H6 103 aa22.36■■□□□ 1.17
ATPAF1-213ENST00000574428 SAGE2PA6NJ88 616 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 C21orf140B9A014 251 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 GSTA4O15217 222 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 BCAS2O75934 225 aaPredicted RBP22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 ACP2P11117 423 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 RTP5Q14D33 572 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 FXNQ16595 210 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 CDC73Q6P1J9 531 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 CYP2R1Q6VVX0 501 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 C11orf65Q8NCR3 313 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 HIPK4Q8NE63 616 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 TNIP2Q8NFZ5 429 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 OR7G1Q8NGA0 311 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 C16orf52Q8NHV5 167 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 FIG4Q92562 907 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 STMN2Q93045 179 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 NUDT9Q9BW91 350 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 TMEM38AQ9H6F2 299 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 FOLH1BQ9HBA9 442 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 HS3ST3B1Q9Y662 390 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 GGT1P19440 569 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 SPINK2P20155 84 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 ATP6V1B2P21281 511 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 ANXA11P50995 505 aaKnown RBP22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 SLC37A1P57057 533 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 DUSP5Q16690 384 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 ERICH5Q6P6B1 374 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 DTX1Q86Y01 620 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 SLC44A2Q8IWA5 706 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms