RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 SVILO95425 2214 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 TRGV5A0A0B4J1U4 118 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 C2orf72A6NCS6 295 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 SLC28A1O00337 649 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 PPM1BO75688 479 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 CLDN14O95500 239 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 IGHG3P01860 377 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 JUNP05412 331 aaKnown RBP16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 ABCB1P08183 1280 aaPredicted RBP16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 LINC00032P0C843 101 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 GDF1P27539 372 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 NCBP2P52298 156 aaKnown RBP eCLIP16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 SAMD14Q8IZD0 417 aaPredicted RBP16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 C17orf47Q8NEP4 570 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 OR2T11Q8NH01 316 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 ZNF675Q8TD23 568 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 PHF10Q8WUB8 498 aaKnown RBP16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 GFM2Q969S9 779 aaKnown RBP16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 METTL7AQ9H8H3 244 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 LRTM1Q9HBL6 345 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 SPRR3Q9UBC9 169 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 B4GALT7Q9UBV7 327 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 ACAD8Q9UKU7 415 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 CCL27Q9Y4X3 112 aa16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 ZGRF1Q86YA3 2104 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 ESPNB1AK53 854 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 C19orf84I3L1E1 186 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 GNB5O14775 395 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 BCKDKO14874 412 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 RGS14O43566 566 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 TRIM3O75382 744 aaPredicted RBP16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 TRAPPC6AO75865 159 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 ENDOUP21128 410 aaKnown RBP16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 TACR1P25103 407 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 MPIP34949 423 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 CASP3P42574 277 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 GSTM5P46439 218 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 CORO7P57737 925 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 RPP38P78345 283 aaKnown RBP16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 TOMM20Q15388 145 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 ZNF630Q2M218 657 aaPredicted RBP16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 KRT71Q3SY84 523 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 ARL13AQ5H913 290 aaPredicted RBP16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 TBCELQ5QJ74 424 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 FAM71E1Q6IPT2 247 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 ANKRD26P1Q6NSI1 321 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 DDIASQ8IXT1 998 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 LIX1Q8N485 282 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 OR7G2Q8NG99 324 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 TMBIM1Q969X1 311 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 HSPBAP1Q96EW2 488 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 EGLN2Q96KS0 407 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 GNRHR2Q96P88 292 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 NODALQ96S42 347 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 ANGPTL4Q9BY76 406 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 TUBB1Q9H4B7 451 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 MYNNQ9NPC7 610 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 COQ3Q9NZJ6 369 aa16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 EXO1Q9UQ84 846 aaKnown RBP16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 USP9YO00507 2555 aaPredicted RBP16.3■□□□□ 0.2
CTDNEP1-207ENST00000572043 A0A1B0GVC2 190 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 ANKRD33BA6NCL7 494 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 OR14I1A6ND48 311 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 FRG2CA6NGY1 282 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 AQP7O14520 342 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 HNRNPRO43390 633 aaKnown RBP16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 UGT2B11O75310 529 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 REM1O75628 298 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 SNX4O95219 450 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 CHEK2O96017 543 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 AGAP20933 346 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 DRD5P21918 477 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 MC3RP41968 323 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 PPICP45877 212 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 ZNF844Q08AG5 666 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 PMPCAQ10713 525 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 KIAA0040Q15053 153 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 GALNTL6Q49A17 601 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 SH2D4BQ5SQS7 431 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 KANK2Q63ZY3 851 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 TMEM211Q6ICI0 200 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 TMEM107Q6UX40 140 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 Q6ZSR9 355 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 PACS2Q86VP3 889 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 SLC34A3Q8N130 599 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 CLHC1Q8NHS4 586 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 FAM76AQ8TAV0 307 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 CA5BP1Q8WTZ4 195 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 TWIST2Q8WVJ9 160 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 HGDQ93099 445 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 TRMOQ9BU70 441 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 FOLH1BQ9HBA9 442 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 GALNT9Q9HCQ5 603 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 C1orf109Q9NX04 203 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 DNAJC15Q9Y5T4 150 aa16.29■□□□□ 0.2
CTDNEP1-207ENST00000572043 C15orf38-AP3S2A0A0A6YYH1 394 aa16.28■□□□□ 0.2
CTDNEP1-207ENST00000572043 MYO1GB0I1T2 1018 aa16.28■□□□□ 0.2
CTDNEP1-207ENST00000572043 ACOX3O15254 700 aa16.28■□□□□ 0.2
CTDNEP1-207ENST00000572043 AKAP10O43572 662 aa16.28■□□□□ 0.2
CTDNEP1-207ENST00000572043 SUSD5O60279 629 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms