RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 TSTD1Q8NFU3 115 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 HMGCLL1Q8TB92 370 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 FANK1Q8TC84 345 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SNAPC3Q92966 411 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 FAM46AQ96IP4 442 aaKnown RBP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SLC6A16Q9GZN6 736 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 NTN4Q9HB63 628 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 CREBZFQ9NS37 354 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 TMEM5Q9Y2B1 443 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 PRODHO43272 600 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SEC13P55735 322 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 WDR5P61964 334 aaKnown RBP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 FGFBP1Q14512 234 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 INAVAQ3KP66 663 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 ZNF782Q6ZMW2 699 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 KRT77Q7Z794 578 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 GPALPP1Q8IXQ4 340 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 NRSN1Q8IZ57 195 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SLC22A18Q96BI1 424 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 LRIG1Q96JA1 1093 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 TM9SF2Q99805 663 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 ELL3Q9HB65 397 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SLC35C2Q9NQQ7 365 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 FBXO8Q9NRD0 319 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 C14orf105Q9NVL8 296 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 A3GALT2U3KPV4 340 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 ANK1P16157 1881 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 MGAMO43451 1857 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 FCER2P06734 321 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 PSMA6P60900 246 aaKnown RBP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SLC8B1Q6J4K2 584 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 TMEM107Q6UX40 140 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 LIMS2Q7Z4I7 341 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 L3MBTL4Q8NA19 623 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 OR52P1PQ8NH57 321 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 DYNC2LI1Q8TCX1 351 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 MOAP1Q96BY2 351 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 CHFRQ96EP1 664 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 S100A16Q96FQ6 103 aaKnown RBP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 NEURL2Q9BR09 285 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 EDDM13A0A1B0GTR0 161 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 ADAM12O43184 909 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 EMC8O43402 210 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 ASGR2P07307 311 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 CYBAP13498 195 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 CTSCP53634 463 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 ID2Q02363 134 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 TATDN3Q17R31 274 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SOWAHCQ53LP3 525 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 LAX1Q8IWV1 398 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SYNPOQ8N3V7 929 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 UBTD2Q8WUN7 234 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SHDQ96IW2 340 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SNX18Q96RF0 628 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 NIPSNAP1Q9BPW8 284 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 SORBS1Q9BX66 1292 aaKnown RBP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 RANGRFQ9HD47 186 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 CNIH4Q9P003 139 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 MAU2Q9Y6X3 613 aa10.56□□□□□ -0.72
PCDHGA4-201ENST00000571252 ADAM23O75077 832 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 PRLP01236 227 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 IL1AP01583 271 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 H2AFB2P0C5Z0 115 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 SLC6A6P31641 620 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 DEFA5Q01523 94 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 MLLT11Q13015 90 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 LRIF1Q5T3J3 769 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 AFMIDQ63HM1 303 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 C17orf99Q6UX52 265 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 MEX3DQ86XN8 651 aaKnown RBP10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 SLC44A3Q8N4M1 653 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 OR4E2Q8NGC2 313 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 OR6C4Q8NGE1 309 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 C15orf40Q8WUR7 153 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 MTG2Q9H4K7 406 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 RC3H2Q9HBD1 1191 aaKnown RBP10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 PCDH10Q9P2E7 1040 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 UBQLN2Q9UHD9 624 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 NDRG4Q9ULP0 352 aaKnown RBP10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 HEBP2Q9Y5Z4 205 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 RGPD3A6NKT7 1758 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 RGPD4Q7Z3J3 1758 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 ARAFP10398 606 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 DRD2P14416 443 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 GIPRP48546 466 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 MAP4K2Q12851 820 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 FAM180AQ6UWF9 173 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 USP51Q70EK9 711 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 HSD11B1LQ7Z5J1 315 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 TMEM179BQ7Z7N9 219 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 NKD1Q969G9 470 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 NDUFAF4Q9P032 175 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 PCDHGB2Q9Y5G2 931 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 PTPRFP10586 1907 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 ELOA3DA6NLF2 546 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 TEX28O15482 410 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 GASTP01350 101 aa10.55□□□□□ -0.72
PCDHGA4-201ENST00000571252 CFL1P23528 166 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms