RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PHYHIPQ92561 330 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 FCGR1BQ92637 280 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MYDGFQ969H8 173 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CCDC124Q96CT7 223 aaKnown RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 RRNAD1Q96FB5 475 aaKnown RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 LINGO1Q96FE5 620 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MISP3Q96FF7 219 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 BSCL2Q96G97 398 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 C16orf58Q96GQ5 468 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SIGLEC10Q96LC7 697 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ZNF578Q96N58 590 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 ZNF583Q96ND8 569 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 NSUN5Q96P11 429 aaKnown RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 SERPINB11Q96P15 392 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CDK15Q96Q40 435 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TEFMQ96QE5 360 aaKnown RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 SMIM14Q96QK8 99 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PANX3Q96QZ0 392 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 HAPLN3Q96S86 360 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TSC22D3Q99576 134 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 KLF6Q99612 283 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 SPAG8Q99932 426 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 PSD2Q9BQI7 771 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 COL25A1Q9BXS0 654 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 PARD6GQ9BYG4 376 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 OR2B2Q9GZK3 357 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ROGDIQ9GZN7 287 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 EGLN1Q9GZT9 426 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TOLLIPQ9H0E2 274 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 RACGAP1Q9H0H5 632 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PLK3Q9H4B4 646 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TMEM231Q9H6L2 316 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 WDR76Q9H967 626 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ACTR8Q9H981 624 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SGK2Q9HBY8 427 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 KCNK9Q9NPC2 374 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CMTM6Q9NX76 183 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SMPD4Q9NXE4 827 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CLDND1Q9NY35 253 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MTCH1Q9NZJ7 389 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CLEC1BQ9P126 229 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 STOX2Q9P2F5 926 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 ONECUT1Q9UBC0 465 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ENOPH1Q9UHY7 261 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TINAGQ9UJW2 476 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 FAF1Q9UNN5 650 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 EXOGQ9Y2C4 368 aaKnown RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 ARL2BPQ9Y2Y0 163 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 RBMX2Q9Y388 322 aaKnown RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 INSL6Q9Y581 213 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 INSL5Q9Y5Q6 135 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SLCO1B1Q9Y6L6 691 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MN1Q10571 1320 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 MDC1Q14676 2089 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 HEATR5BQ9P2D3 2071 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 LRP4O75096 1905 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 IGLV3-10A0A075B6K4 115 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 A0A087WWL8 130 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 A0A0D9SEW6 157 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 GNG14A0A1W2PPG7 69 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TCRBV9S1A1TA0A576 114 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 HMX2A2RU54 273 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 RAB19A4D1S5 217 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 LINC01553A4QN01 128 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ANKDD1BA6NHY2 528 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ERI2A8K979 691 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 ARHGEF33A8MVX0 844 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 H0Y8X5 98 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 MAN2B1O00754 1011 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TRAFD1O14545 582 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 ABCD4O14678 606 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SLC9A3R1O14745 358 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 AURKAO14965 403 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 MID1O15344 667 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 LCMT2O60294 686 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 SNX3O60493 162 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 FCMRO60667 390 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ATG13O75143 517 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 NME6O75414 186 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 SUPT3HO75486 399 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 NDUFS3O75489 264 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 GMNNO75496 209 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 RFPL2O75678 378 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ATP6V1G2O95670 118 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TOP3BO95985 862 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 PEX11BO96011 259 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 F10P00742 488 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 OAS1P00973 400 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 PRKCGP05129 697 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 GPIP06744 558 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 CD3EP07766 207 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 OR2T7P0C7T2 308 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SLC35E2BP0CK96 405 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SLC35E2P0CK97 266 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 COX5BP10606 129 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 CTSAP10619 480 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 MBL2P11226 248 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 NQO1P15559 274 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 CBR1P16152 277 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 UGT1A6P19224 532 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms