RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 FAM120BQ96EK7 910 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 VMP1Q96GC9 406 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 AURKBQ96GD4 344 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 NAF1Q96HR8 494 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 ANKRD27Q96NW4 1050 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 RAB3IPQ96QF0 476 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 KCTD14Q9BQ13 255 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 ECSITQ9BQ95 431 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 BTBD10Q9BSF8 475 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 PAIP1Q9H074 479 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 C1orf21Q9H246 121 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 LRMDAQ9H2I8 198 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 CCDC86Q9H6F5 360 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 CXorf36Q9H7Y0 433 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 AKIRIN1Q9H9L7 192 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 TPT1P8Q9HAU6 139 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 BRD7Q9NPI1 651 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 THUMPD1Q9NXG2 353 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 VAPAQ9P0L0 249 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 PRPF19Q9UMS4 504 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR10H1Q9Y4A9 318 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 PCDHB14Q9Y5E9 798 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 PCDHGA6Q9Y5G7 932 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 KCNMB2Q9Y691 235 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 FRYLO94915 3013 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 GVINP1Q7Z2Y8 2422 aa6.14□□□□□ -1.43
CTDNEP1-204ENST00000570484 EP300Q09472 2414 aaPredicted RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 IGHV1-45A0A0A0MS14 117 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 IGHV3-20A0A0C4DH32 117 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 TRBV11-1A0A0K0K1C0 115 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 CDC14CA4D256 554 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 TTC36A6NLP5 189 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR6C76A6NM76 312 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF891A8MT65 544 aaPredicted RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 C5orf58C9J3I9 102 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 FXYD1O00168 92 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 UPK1AO00322 258 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 PLOD2O00469 737 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 GSTA4O15217 222 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 RRP8O43159 456 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 PLOD3O60568 738 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 SCN2BO60939 215 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 CREG1O75629 220 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 CIB2O75838 187 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 DNAJC8O75937 253 aaPredicted RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 RECKO95980 971 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 HPP00738 406 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 HMGN2P05204 90 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ALOX5P09917 674 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 COX6A1P12074 109 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 LIFP15018 202 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 CD1EP15812 388 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 SSTR4P31391 388 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 KRT20P35900 424 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 PGM1P36871 562 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 RRADP55042 308 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC26A5P58743 744 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 NCALDP61601 193 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 RPS26P62854 115 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 PHC1P78364 1004 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 MAP4K2Q12851 820 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ATP1A4Q13733 1029 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 GNA13Q14344 377 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 SSPNQ14714 243 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 EXOSC7Q15024 291 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 TGIF1Q15583 401 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 PRSS53Q2L4Q9 553 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 TRMT12Q53H54 448 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 LACTB2Q53H82 288 aaPredicted RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 RABL3Q5HYI8 236 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 GCNT6Q5T4J0 391 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 FAM69BQ5VUD6 431 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 BROXQ5VW32 411 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 SAXO2Q658L1 398 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 NANOGP8Q6NSW7 305 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 TNFAIP8L2Q6P589 184 aaPredicted RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 TMEM205Q6UW68 189 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 HSDL2Q6YN16 418 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 NDUFAF7Q7L592 441 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 C16orf62Q7Z3J2 963 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 C6orf120Q7Z4R8 191 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ATCAYQ86WG3 371 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 RNF130Q86XS8 419 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 DTX1Q86Y01 620 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 SHISA5Q8N114 240 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 CLEC4FQ8N1N0 589 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 CDRT4Q8N9R6 151 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 CLEC1AQ8NC01 280 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 B3GNT7Q8NFL0 401 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR2T12Q8NG77 320 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR52N2Q8NGI0 321 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 GPR151Q8TDV0 419 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ADAMTS15Q8TE58 950 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZFP90Q8TF47 636 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 FGF11Q92914 225 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 CCDC124Q96CT7 223 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 NEURL3Q96EH8 262 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ABHD17AQ96GS6 310 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 CPPED1Q9BRF8 314 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms