RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GRIP1Q9Y3R0 1128 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 RELNP78509 3460 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 A0A0A6YYH2 397 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 A6NJ64 397 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 TCAPO15273 167 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 GDF9O60383 454 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 PRPS1L1P21108 318 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 HRH2P25021 359 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 CMPK1P30085 196 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 GNPDA1P46926 289 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 ALDH3B2P48448 385 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 SERPINH1P50454 418 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 PLK1P53350 603 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 ELF3P78545 371 aaPredicted RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 MRPS22P82650 360 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 DECR1Q16698 335 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 LACTB2Q53H82 288 aaPredicted RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 CMPK2Q5EBM0 449 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 TNFAIP8L3Q5GJ75 292 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 FNBP1LQ5T0N5 605 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 UTS2BQ765I0 119 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 OR2L5Q8NG80 312 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 APOBEC4Q8WW27 367 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 EXOSC8Q96B26 276 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 APOLD1Q96LR9 279 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 RANBP9Q96S59 729 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 SCNM1Q9BWG6 230 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 RTN4RQ9BZR6 473 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 HOXD1Q9GZZ0 328 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 LIPT1Q9Y234 373 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 WIF1Q9Y5W5 379 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 A0A087WZY1 265 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 SPAARA0A1B0GVQ0 90 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 TUBAL3A6NHL2 446 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 IDSB3KWA1 339 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 USP12O75317 370 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 TNFSF15O95150 251 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 BCL10O95999 233 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 GABRG2P18507 467 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 SLC6A4P31645 630 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 HCAR3P49019 387 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 RPL34P49207 117 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 MAGOHP61326 146 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 RIN1Q13671 783 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 TAF1AQ15573 450 aaPredicted RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 HES3Q5TGS1 186 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 KIAA0930Q6ICG6 404 aaPredicted RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 Q6ZVU0 165 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 ARCQ7LC44 396 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 TLCD1Q96CP7 247 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 ZFRQ96KR1 1074 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 EGLN1Q9GZT9 426 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 MAGT1Q9H0U3 335 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 ZCCHC4Q9H5U6 513 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 ZFYVE1Q9HBF4 777 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 POFUT2Q9Y2G5 429 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 PUS1Q9Y606 427 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMG1-217ENST00000569764 COL4A4P53420 1690 aaPredicted RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 ISM1B1AKI9 464 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 FAM72CH0Y354 149 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 ACOT7O00154 380 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 HRO43593 1189 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 KDELR3O43731 214 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 RBMXL2O75526 392 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 GATBO75879 557 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 ADRB3P13945 408 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 HMGA1P17096 107 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 TGM2P21980 687 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 FDXRP22570 491 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 KIR3DL2P43630 455 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 RPS14P62263 151 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 SCAPQ12770 1279 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 CERCAMQ5T4B2 595 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 FAM72AQ5TYM5 149 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 PLCXD3Q63HM9 321 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 FCRL6Q6DN72 434 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 FAM72DQ6L9T8 149 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 CROCCP2Q86T23 111 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 FAM72BQ86X60 149 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 RBM45Q8IUH3 476 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 CLYBLQ8N0X4 340 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 ZBTB2Q8N680 514 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 OR10H5Q8NGA6 315 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 TSEN15Q8WW01 171 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 DNAJC9Q8WXX5 260 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 SLC7A6OSQ96CW6 309 aaPredicted RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 SRMSQ9H3Y6 488 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 C19orf12Q9NSK7 152 aa6.29□□□□□ -1.4
SMG1-217ENST00000569764 DIMT1Q9UNQ2 313 aaKnown RBP6.29□□□□□ -1.4
SMG1-217ENST00000569764 CD8B2A6NJW9 211 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CASKO14936 926 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SLC22A2O15244 555 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 DDAH2O95865 285 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PAK4O96013 591 aaPredicted RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 PSMD4P55036 377 aaKnown RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 ATP5J2P56134 94 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 RPS24P62847 133 aaKnown RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 IL11RAQ14626 422 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SLC36A3Q495N2 470 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 GPR33Q49SQ1 333 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms