RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 ACOX3O15254 700 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 HS6ST1O60243 411 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 GLSO94925 669 aaPredicted RBP10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 AGFG2O95081 481 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 P04436 131 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 IFI6P09912 130 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 RNF224P0DH78 156 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 CT45A8P0DMV1 189 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 CT45A9P0DMV2 189 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 H2AFXP16104 143 aaPredicted RBP10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 NAGAP17050 411 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 ABCD3P28288 659 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 RFC3P40938 356 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 FRKP42685 505 aaPredicted RBP10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 ASMTP46597 345 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 RPL14P50914 215 aaKnown RBP10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 NCBP2P52298 156 aaKnown RBP eCLIP10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 NRG3P56975 720 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 RPS6KA2Q15349 733 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 HYAL4Q2M3T9 481 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 ATP6AP1LQ52LC2 224 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 C4orf17Q53FE4 359 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 ZNF385BQ569K4 471 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 CT45A2Q5DJT8 189 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 CMPK2Q5EBM0 449 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 AGBL2Q5U5Z8 902 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 TMEM64Q6YI46 380 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 GK5Q6ZS86 529 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 FAM47EQ6ZV65 393 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 KIRREL3Q8IZU9 778 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 FBXW8Q8N3Y1 598 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 CLHC1Q8NHS4 586 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 GFM2Q969S9 779 aaKnown RBP10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 RELTQ969Z4 430 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 ARL8AQ96BM9 186 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 NTNG2Q96CW9 530 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 MTERF3Q96E29 417 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 VSTM2LQ96N03 204 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 PSMG3-AS1Q96PY0 264 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 BTBD9Q96Q07 612 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 SECISBP2Q96T21 854 aaKnown RBP10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 PAIP2Q9BPZ3 127 aaKnown RBP10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 TTTY12Q9BZ98 90 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 ZDHHC11Q9H8X9 412 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 PLSCR2Q9NRY7 297 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 CNOT11Q9UKZ1 510 aaKnown RBP10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 SLC5A6Q9Y289 635 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 ZNF835Q9Y2P0 537 aa10.19□□□□□ -0.78
SHCBP1-207ENST00000569702 SPTBN1Q01082 2364 aaKnown RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 DIDO1Q9BTC0 2240 aaKnown RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 FRG2CA6NGY1 282 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 UPK1AO00322 258 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 TP53I11O14683 189 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 TFECO14948 347 aaPredicted RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 LRRTM2O43300 516 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 AKAP10O43572 662 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 SNNO75324 88 aaPredicted RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 LRATO95237 230 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 PSMG1O95456 288 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 LDLRP01130 860 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 ABCB1P08183 1280 aaPredicted RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 PRPS2P11908 318 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 MAPK1P28482 360 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 NTSP30990 170 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 PIGAP37287 484 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 MC3RP41968 323 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 DNASE1L1P49184 302 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 TMED10P49755 219 aaKnown RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 FBXW4P57775 412 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 EMX2Q04743 252 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 RBPJQ06330 500 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 SMU1Q2TAY7 513 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 IL23RQ5VWK5 629 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 ANKRD26P1Q6NSI1 321 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 Q6ZPB1 254 aaPredicted RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 RGS9BPQ6ZS82 235 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 FGD2Q7Z6J4 655 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 GHDCQ8N2G8 530 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 OR2L13Q8N349 312 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 LIX1Q8N485 282 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 FNDC5Q8NAU1 212 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 FAM13CQ8NE31 585 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 OR52N2Q8NGI0 321 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 RAB3IL1Q8TBN0 382 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 SPPL2AQ8TCT8 520 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 SSC4DQ8WTU2 575 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 CIDECQ96AQ7 238 aaPredicted RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 PPCDCQ96CD2 204 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 TUBGCP3Q96CW5 907 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 ELP4Q96EB1 424 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 IL1RL2Q9HB29 575 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 THAP1Q9NVV9 213 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 ASIC5Q9NY37 505 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 TUBA8Q9NY65 449 aaPredicted RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 TAS2R9Q9NYW1 312 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 ATP6V1HQ9UI12 483 aa10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 C19orf53Q9UNZ5 99 aaPredicted RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.18□□□□□ -0.78
SHCBP1-207ENST00000569702 GTF3C1Q12789 2109 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms