RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DNAJB8Q8NHS0 232 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 RP9Q8TA86 221 aaKnown RBP14.9□□□□□ -0.02
USB1-215ENST00000569252 ZNF721Q8TF20 911 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 CCDC115Q96NT0 180 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 SLAMF7Q9NQ25 335 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 ZCCHC3Q9NUD5 404 aaKnown RBP14.9□□□□□ -0.02
USB1-215ENST00000569252 ABI3Q9P2A4 366 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 PPIEQ9UNP9 301 aaKnown RBP14.9□□□□□ -0.02
USB1-215ENST00000569252 KCNMB2Q9Y691 235 aa14.9□□□□□ -0.02
USB1-215ENST00000569252 CROCCQ5TZA2 2017 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 C2orf92A0A1B0GVN3 265 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 SOX30O94993 753 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 KCNH1O95259 989 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 ALPPP05187 535 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 CT62P0C5K7 136 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 UQCRC2P22695 453 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 SSTR4P31391 388 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 PTGER1P34995 402 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 DCAF7P61962 342 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 MGAT2Q10469 447 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 EXOSC7Q15024 291 aaKnown RBP14.89□□□□□ -0.03
USB1-215ENST00000569252 AGAP7PQ5VUJ5 663 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 ANGPTL8Q6UXH0 198 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 OR7G2Q8NG99 324 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 OR56A1Q8NGH5 318 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 OR8K3Q8NH51 312 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 ELP5Q8TE02 316 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 CTHRC1Q96CG8 243 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 ZNF354BQ96LW1 612 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 AGAP4Q96P64 663 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 NUDT9Q9BW91 350 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 CCDC106Q9BWC9 280 aa14.89□□□□□ -0.03
USB1-215ENST00000569252 FAF1Q9UNN5 650 aaPredicted RBP14.89□□□□□ -0.03
USB1-215ENST00000569252 C19orf53Q9UNZ5 99 aaPredicted RBP14.89□□□□□ -0.03
USB1-215ENST00000569252 SPTBN1Q01082 2364 aaKnown RBP14.88□□□□□ -0.03
USB1-215ENST00000569252 BBIP1A8MTZ0 92 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 K7EM74 188 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 HRKO00198 91 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 ERN1O75460 977 aaKnown RBP14.88□□□□□ -0.03
USB1-215ENST00000569252 KRT75O95678 551 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 IGKV3-11P04433 115 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 KRT16P08779 473 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 PRIM2P49643 509 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 CDK9P50750 372 aaKnown RBP14.88□□□□□ -0.03
USB1-215ENST00000569252 GPR143P51810 404 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 NRG3P56975 720 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 SLC37A1P57057 533 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 RNF4P78317 190 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 PHC1P78364 1004 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 CHAF1BQ13112 559 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 MYBPC3Q14896 1274 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 ABHD17BQ5VST6 288 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 ZCCHC12Q6PEW1 402 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 SLC2A7Q6PXP3 512 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 TMEM64Q6YI46 380 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 TAGAPQ8N103 731 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 OR2L13Q8N349 312 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 APCDD1LQ8NCL9 501 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 GOT1L1Q8NHS2 421 aaPredicted RBP14.88□□□□□ -0.03
USB1-215ENST00000569252 PSMA8Q8TAA3 256 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 SFXN5Q8TD22 340 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 BRIX1Q8TDN6 353 aaKnown RBP14.88□□□□□ -0.03
USB1-215ENST00000569252 GAL3ST4Q96RP7 486 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 GID8Q9NWU2 228 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 STMN3Q9NZ72 180 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 ZNF639Q9UID6 485 aa14.88□□□□□ -0.03
USB1-215ENST00000569252 ICE1Q9Y2F5 2266 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 RNF103-CHMP3A0A140T963 221 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 TTC36A6NLP5 189 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 MKRN2OSH3BPM6 223 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 UPK1AO00322 258 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 SCN2BO60939 215 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 GSNP06396 782 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 ITGAMP11215 1152 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 S1PR1P21453 382 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 ANXA11P50995 505 aaKnown RBP14.87□□□□□ -0.03
USB1-215ENST00000569252 SOX8P57073 446 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 FOXK1P85037 733 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 ZNF155Q12901 538 aaPredicted RBP14.87□□□□□ -0.03
USB1-215ENST00000569252 ART3Q13508 389 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 MEP1AQ16819 746 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 CRB2Q5IJ48 1285 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 C6orf120Q7Z4R8 191 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 RPS19BP1Q86WX3 136 aaKnown RBP14.87□□□□□ -0.03
USB1-215ENST00000569252 SNX32Q86XE0 403 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 KIF2BQ8N4N8 673 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 SIRT6Q8N6T7 355 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 ZNF321PQ8N8H1 164 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 ZNF615Q8N8J6 731 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 C16orf52Q8NHV5 167 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 NUBPLQ8TB37 319 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 THAP3Q8WTV1 239 aaPredicted RBP14.87□□□□□ -0.03
USB1-215ENST00000569252 GTF2H4Q92759 462 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 FAM120BQ96EK7 910 aaKnown RBP14.87□□□□□ -0.03
USB1-215ENST00000569252 MS4A4EQ96PG1 132 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 SLC35A5Q9BS91 424 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 MYLK2Q9H1R3 596 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 CDCP1Q9H5V8 836 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 CXorf36Q9H7Y0 433 aa14.87□□□□□ -0.03
USB1-215ENST00000569252 EFCAB1Q9HAE3 211 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms