RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 ASIC5Q9NY37 505 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 TAS2R9Q9NYW1 312 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 ATP6V1HQ9UI12 483 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 OR10H1Q9Y4A9 318 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 USH1CQ9Y6N9 552 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 COL6A6A6NMZ7 2263 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 KALRNO60229 2985 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 PLOD3O60568 738 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 TBX19O60806 448 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 ERN1O75460 977 aaKnown RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 SLITRK5O94991 958 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 FBXO45P0C2W1 286 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 CCL3P10147 92 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 ZNF24P17028 368 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 GNLYP22749 145 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 SOAT1P35610 550 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 UQCRFS1P47985 274 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 EMDP50402 254 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 CDK9P50750 372 aaKnown RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 CLDN8P56748 225 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 FBXW4P57775 412 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 DCAF7P61962 342 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 MRPL49Q13405 166 aaKnown RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 ZNHIT3Q15649 155 aaPredicted RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 SLC9B1Q4ZJI4 515 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 PRAMEF20Q5VT98 475 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 SLC22A10Q63ZE4 541 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 LARP4Q71RC2 724 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDT1-203ENST00000569140 SPATA19Q7Z5L4 167 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 WDR53Q7Z5U6 358 aaPredicted RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 ZNF227Q86WZ6 799 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 SLC44A2Q8IWA5 706 aaPredicted RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 ARFGAP2Q8N6H7 521 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 ZNF441Q8N8Z8 693 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 FAR1Q8WVX9 515 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 CKAP2Q8WWK9 683 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 ADIPOR1Q96A54 375 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 OMA1Q96E52 524 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 ELP4Q96EB1 424 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 THOC1Q96FV9 657 aaKnown RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 CHMP6Q96FZ7 201 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 ZNF764Q96H86 408 aaPredicted RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 JSRP1Q96MG2 331 aaPredicted RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 DUSP26Q9BV47 211 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 TRIM45Q9H8W5 580 aaPredicted RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 C3orf14Q9HBI5 128 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 MAPRE3Q9UPY8 281 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 PCDHGB6Q9Y5F9 930 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 NPFFR2Q9Y5X5 522 aa11.82□□□□□ -0.52
CDT1-203ENST00000569140 SMG1Q96Q15 3661 aaKnown RBP11.82□□□□□ -0.52
CDT1-203ENST00000569140 A0A087WV62 115 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 A0A0G2JMM0 328 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 A0A1W2PPB8 328 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 A0A1W2PRS3 328 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 FRG2CA6NGY1 282 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 FAM166BA8MTA8 275 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 KIR3DP1A8MWS1 328 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 TCP11X1B4DZS4 312 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 C9JVG2 144 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 NPIPA5E9PKD4 350 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 UPK1AO00322 258 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 TP53I11O14683 189 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 TFECO14948 347 aaPredicted RBP11.81□□□□□ -0.52
CDT1-203ENST00000569140 REM1O75628 298 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 WISP1O95388 367 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 C6orf47O95873 294 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 ALDOCP09972 364 aaKnown RBP11.81□□□□□ -0.52
CDT1-203ENST00000569140 ABCD3P28288 659 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 IL12BP29460 328 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 SOX18P35713 384 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 PIGAP37287 484 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 RFX3P48380 749 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 CLNS1AP54105 237 aaKnown RBP11.81□□□□□ -0.52
CDT1-203ENST00000569140 CORO7P57737 925 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 KCNJ2P63252 427 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 RPP38P78345 283 aaKnown RBP11.81□□□□□ -0.52
CDT1-203ENST00000569140 ZNF791Q3KP31 576 aaPredicted RBP11.81□□□□□ -0.52
CDT1-203ENST00000569140 FHL5Q5TD97 284 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 OR4F3Q6IEY1 312 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 MAVSQ7Z434 540 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 DND1Q8IYX4 353 aaKnown RBP11.81□□□□□ -0.52
CDT1-203ENST00000569140 OR2L13Q8N349 312 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 GOLM1Q8NBJ4 401 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 C17orf47Q8NEP4 570 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 NUP43Q8NFH3 380 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 OR10G3Q8NGC4 313 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 DNAJB8Q8NHS0 232 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 FBXO30Q8TB52 745 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 NR4A3Q92570 626 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 JADE3Q92613 823 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 DIO2Q92813 273 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 HSPBAP1Q96EW2 488 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 SGCZQ96LD1 299 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 FRMD6Q96NE9 622 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 ZBTB18Q99592 522 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 MED4Q9NPJ6 270 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 ACSS1Q9NUB1 689 aaPredicted RBP11.81□□□□□ -0.52
CDT1-203ENST00000569140 ZCCHC3Q9NUD5 404 aaKnown RBP11.81□□□□□ -0.52
CDT1-203ENST00000569140 AIG1Q9NVV5 245 aa11.81□□□□□ -0.52
CDT1-203ENST00000569140 NPIPA1Q9UND3 350 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms