RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CA14Q9ULX7 337 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 ZNF860A6NHJ4 632 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 UGT2B17O75795 530 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 CDK4P11802 303 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 GABRB1P18505 474 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 MAP2K4P45985 399 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 MVKQ03426 396 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 DHRS4L2Q6PKH6 230 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 FAM92BQ6ZTR7 304 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 USP53Q70EK8 1073 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 AHSA2Q719I0 299 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 HMGN2P46Q86SG4 172 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 MS4A4EQ96PG1 132 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 TRNT1Q96Q11 434 aaKnown RBP17.02■□□□□ 0.32
SMPD3-211ENST00000568373 FUZQ9BT04 418 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 PINK1Q9BXM7 581 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 SLC38A1Q9H2H9 487 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 IMPAD1Q9NX62 359 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 CALML5Q9NZT1 146 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 FTSJ1Q9UET6 329 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 MGAT4BQ9UQ53 548 aa17.02■□□□□ 0.32
SMPD3-211ENST00000568373 DSPPQ9NZW4 1301 aa17.02■□□□□ 0.31
SMPD3-211ENST00000568373 ZAR1LA6NP61 321 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 CHMP24386 653 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 ACVR2AP27037 513 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 NFATC3Q12968 1075 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 PIN1Q13526 163 aaPredicted RBP17.01■□□□□ 0.31
SMPD3-211ENST00000568373 ATAD3BQ5T9A4 648 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 PRSS41Q7RTY9 318 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 ZNF438Q7Z4V0 828 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 OR4N5Q8IXE1 308 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 CSNK1A1LQ8N752 337 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 OR6T1Q8NGN1 323 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 SLC7A13Q8TCU3 470 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 QRSL1Q9H0R6 528 aaKnown RBP17.01■□□□□ 0.31
SMPD3-211ENST00000568373 GIN1Q9NXP7 522 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 PSORS1C1Q9UIG5 152 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 A0A0C4DFX4 3053 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 A0A1W2PRQ8 180 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 B4DGG1 531 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 OR10H3O60404 316 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 FADS2O95864 444 aaKnown RBP17.01■□□□□ 0.31
SMPD3-211ENST00000568373 CPMP14384 443 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 CRISP1P54107 249 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 DGCR6Q14129 220 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 C6orf132Q5T0Z8 1188 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 MFSD12Q6NUT3 480 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 C16orf62Q7Z3J2 963 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 OR2L13Q8N349 312 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 DNAJC22Q8N4W6 341 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 UCK2Q9BZX2 261 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 ACOT13Q9NPJ3 140 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 ENPP5Q9UJA9 477 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 POMT2Q9UKY4 750 aa17.01■□□□□ 0.31
SMPD3-211ENST00000568373 SH3PXD2BA1X283 911 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 DUXAA6NLW8 204 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 NME6O75414 186 aaPredicted RBP17■□□□□ 0.31
SMPD3-211ENST00000568373 TYRP1P17643 537 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 CTSKP43235 329 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 CDC42P60953 191 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 CHRNEQ04844 493 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 SMAD2Q15796 467 aaKnown RBP17■□□□□ 0.31
SMPD3-211ENST00000568373 SYT6Q5T7P8 510 aaPredicted RBP17■□□□□ 0.31
SMPD3-211ENST00000568373 ARMC6Q6NXE6 501 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 CDC73Q6P1J9 531 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 CCDC81Q6ZN84 652 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 SLC16A12Q6ZSM3 486 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 ANKRD13BQ86YJ7 626 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 TMEFF1Q8IYR6 380 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 NLGN4XQ8N0W4 816 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 ADAMTS15Q8TE58 950 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 SLC35A4Q96G79 324 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 COPS4Q9BT78 406 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 FNDC11Q9BVV2 318 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 PTGFRNQ9P2B2 879 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 REV1Q9UBZ9 1251 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 DUSP12Q9UNI6 340 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 SPACA6W5XKT8 324 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 SYT5O00445 386 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 MAN1A2O60476 641 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 ALPPP05187 535 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 OSMP13725 252 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 PORP16435 677 aaPredicted RBP17■□□□□ 0.31
SMPD3-211ENST00000568373 UGT2B15P54855 530 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 FAM214AQ32MH5 1076 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 LEXMQ3ZCV2 418 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 TMEM236Q5W0B7 351 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 HEPHL1Q6MZM0 1159 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 PGBD2Q6P3X8 592 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 WDR53Q7Z5U6 358 aaPredicted RBP17■□□□□ 0.31
SMPD3-211ENST00000568373 SLC16A11Q8NCK7 471 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 PRRC1Q96M27 445 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 CCDC3Q9BQI4 270 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 SEMA6CQ9H3T2 930 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 DNAAF2Q9NVR5 837 aaKnown RBP17■□□□□ 0.31
SMPD3-211ENST00000568373 FKBP14Q9NWM8 211 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 SCN2AQ99250 2005 aa17■□□□□ 0.31
SMPD3-211ENST00000568373 CLCA1A8K7I4 914 aa16.99■□□□□ 0.31
SMPD3-211ENST00000568373 GALR3O60755 368 aaPredicted RBP16.99■□□□□ 0.31
SMPD3-211ENST00000568373 AGR2O95994 175 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms