RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ERVK-19Q9WJR5 959 aa2.96□□□□□ -1.94
HERPUD1-212ENST00000567944 KCNK6Q9Y257 313 aa2.96□□□□□ -1.94
HERPUD1-212ENST00000567944 CLTCL1P53675 1640 aa2.96□□□□□ -1.94
HERPUD1-212ENST00000567944 ANKRD30AQ9BXX3 1397 aa2.96□□□□□ -1.94
HERPUD1-212ENST00000567944 SHANK3Q9BYB0 1731 aa2.96□□□□□ -1.94
HERPUD1-212ENST00000567944 WNK3Q9BYP7 1800 aa2.96□□□□□ -1.94
HERPUD1-212ENST00000567944 HCFC1P51610 2035 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 VPS8Q8N3P4 1428 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 RRBP1Q9P2E9 1410 aaKnown RBP2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 FAM170AA1A519 330 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 LRRD1A4D1F6 860 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 PSMD3O43242 534 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 KIAA0513O60268 411 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 E2F6O75461 281 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 SBK2P0C263 348 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 OR9G9P0C7N8 305 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 CT45A8P0DMV1 189 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 CT45A9P0DMV2 189 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 EZRP15311 586 aaKnown RBP2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 PAX7P23759 505 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 SPRP35270 261 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 ELK3P41970 407 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 TKTL1P51854 596 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 UCP2P55851 309 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 NUCB2P80303 420 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 GABPB1Q06547 395 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 IFT88Q13099 833 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 HEPACAMQ14CZ8 416 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 RPS6KA1Q15418 735 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 TAF7Q15545 349 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 C17orf58Q2M2W7 97 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 FUT11Q495W5 492 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 CT45A2Q5DJT8 189 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 CD164L2Q6UWJ8 174 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 STHQ8IWL8 128 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 IQCF2Q8IXL9 164 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 CCDC170Q8IYT3 715 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 SFRP1Q8N474 314 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 PDCL2Q8N4E4 241 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 OR6T1Q8NGN1 323 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 OR1K1Q8NGR3 316 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 OR4L1Q8NH43 312 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 UBTD2Q8WUN7 234 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 RSPH1Q8WYR4 309 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 RANBP9Q96S59 729 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 PSMB7Q99436 277 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 DPEP3Q9H4B8 488 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 DHRS4-AS1Q9P1J3 65 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 SUN2Q9UH99 717 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 ZNF107Q9UII5 783 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 FOXA2Q9Y261 457 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 MRPL11Q9Y3B7 192 aaKnown RBP2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 CPQQ9Y646 472 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 NRKQ7Z2Y5 1582 aa2.95□□□□□ -1.94
HERPUD1-212ENST00000567944 RAD50Q92878 1312 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 CCDC144AA2RUR9 1427 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 FOXI3A8MTJ6 420 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 ZNF253O75346 499 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 SH3BGRLO75368 114 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 ERLIN1O75477 346 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 KRTAP1-4P0C5Y4 121 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 CTNNA1P35221 906 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 TRPC1P48995 793 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 SMSP52788 366 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 C1QTNF8P60827 252 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 HSPA14Q0VDF9 509 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 P2RY14Q15391 338 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 SMU1Q2TAY7 513 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 VWA2Q5GFL6 755 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 AP1ARQ63HQ0 302 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 ARMCX5Q6P1M9 558 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 TMUB2Q71RG4 321 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 HIPK1Q86Z02 1210 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 MYOCDQ8IZQ8 938 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 FBXW8Q8N3Y1 598 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 RELL2Q8NC24 303 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 GOLGA5Q8TBA6 731 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 TCP11Q8WWU5 503 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 ATP6V1E2Q96A05 226 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 ESAMQ96AP7 390 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 ANKRD27Q96NW4 1050 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 JPH2Q9BR39 696 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 LZTS2Q9BRK4 669 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 RBM24Q9BX46 236 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 MRPL9Q9BYD2 267 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 NAPBQ9H115 298 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 ALDH8A1Q9H2A2 487 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 DDX28Q9NUL7 540 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 DNAJC11Q9NVH1 559 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 MGAT4AQ9UM21 535 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 STX8Q9UNK0 236 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 EXOC7Q9UPT5 735 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 ITM2BQ9Y287 266 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 SBNO1A3KN83 1393 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 MAP3K5Q99683 1374 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 NRXN1Q9ULB1 1477 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 LMO7Q8WWI1 1683 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 PCNTO95613 3336 aa2.94□□□□□ -1.94
HERPUD1-212ENST00000567944 TNS3Q68CZ2 1445 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 PAPPAQ13219 1627 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms