RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	TBCD	Q9BTW9	1192 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	PINK1	Q9BXM7	581 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	PITHD1	Q9GZP4	211 aa	Predicted RBP	12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	OR10A4	Q9H209	315 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	NT5DC2	Q9H857	520 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	EML4	Q9HC35	981 aa	Known RBP	12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	GALNT9	Q9HCQ5	603 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	DKKL1	Q9UK85	242 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	FBXO5	Q9UKT4	447 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	B3GALT5	Q9Y2C3	310 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	GRID2IP	A4D2P6	1211 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	CD8A	P01732	235 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	CLPS	P04118	112 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	ABCB1	P08183	1280 aa	Predicted RBP	12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	PEPD	P12955	493 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	CREB1	P16220	341 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	ATP5A1	P25705	553 aa	Known RBP	12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	ABCD3	P28288	659 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	NEK2	P51955	445 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	SNX1	Q13596	522 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	SPA17	Q15506	151 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	SLCO4C1	Q6ZQN7	724 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	VN1R5	Q7Z5H4	357 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	DTX2	Q86UW9	622 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	GPSM1	Q86YR5	675 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	KBTBD8	Q8NFY9	601 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	PROX1	Q92786	737 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	VPS39	Q96JC1	886 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	NODAL	Q96S42	347 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	NGB	Q9NPG2	151 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	PLSCR4	Q9NRQ2	329 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	MS4A12	Q9NXJ0	267 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	GPR52	Q9Y2T5	361 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	ZNF281	Q9Y2X9	895 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	EMC9	Q9Y3B6	208 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	ZNF175	Q9Y473	711 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	SNX8	Q9Y5X2	465 aa		12.35	□□□□□ -0.43
SMG1-213	ENST00000567737	TNFRSF21	O75509	655 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	PPM1B	O75688	479 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	WDR47	O94967	919 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	NAGA	P17050	411 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	HIST1H1T	P22492	207 aa	Predicted RBP	12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	TCEA1	P23193	301 aa	Known RBP	12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	SSTR4	P31391	388 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	DEK	P35659	375 aa	Known RBP	12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	PTGDS	P41222	190 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	ACTG1	P63261	375 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	PON3	Q15166	354 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	GUSBP1	Q15486	140 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	AP5B1	Q2VPB7	878 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	C4orf22	Q6V702	233 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	BEND4	Q6ZU67	534 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	NUP54	Q7Z3B4	507 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	ZNF525	Q8N782	197 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	OR6K3	Q8NGY3	331 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	FNDC9	Q8TBE3	224 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	C1orf54	Q8WWF1	131 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	EGFL8	Q99944	293 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	ZFAND3	Q9H8U3	227 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	C20orf96	Q9NUD7	363 aa	Predicted RBP	12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	MOCS1	Q9NZB8	636 aa		12.34	□□□□□ -0.43
SMG1-213	ENST00000567737	PKD1L1	Q8TDX9	2849 aa		12.33	□□□□□ -0.43
SMG1-213	ENST00000567737	RTCA	O00442	366 aa	Known RBP	12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	MBD3	O95983	291 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	FCGR2A	P12318	317 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	TLX1	P31314	330 aa	Predicted RBP	12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	SSR2	P43308	183 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	COMP	P49747	757 aa	Predicted RBP	12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	SARNP	P82979	210 aa	Known RBP	12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	CDK16	Q00536	496 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	ZNF844	Q08AG5	666 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	OXLD1	Q5BKU9	147 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	AGAP6	Q5VW22	663 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	ADNP2	Q6IQ32	1131 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	PEX26	Q7Z412	305 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	UBE3D	Q7Z6J8	389 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	PLCZ1	Q86YW0	608 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	C17orf47	Q8NEP4	570 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	ZFAND2B	Q8WV99	257 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	HGD	Q93099	445 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	ADIPOR1	Q96A54	375 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	CACNG6	Q9BXT2	260 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	STMN4	Q9H169	189 aa	Predicted RBP	12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	CISD1	Q9NZ45	108 aa	Known RBP	12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	WHRN	Q9P202	907 aa		12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	PACSIN2	Q9UNF0	486 aa	Predicted RBP	12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.33	□□□□□ -0.44
SMG1-213	ENST00000567737	YLPM1	P49750	1951 aa	Known RBP	12.32	□□□□□ -0.44
SMG1-213	ENST00000567737	ZCWPW2	A0A1B0GU75	182 aa		12.32	□□□□□ -0.44
SMG1-213	ENST00000567737	MAGEB16	A2A368	324 aa		12.32	□□□□□ -0.44
SMG1-213	ENST00000567737	PRAMEF25	A6NGN4	478 aa		12.32	□□□□□ -0.44
SMG1-213	ENST00000567737	MIF4GD	A9UHW6	222 aa	Known RBP	12.32	□□□□□ -0.44
SMG1-213	ENST00000567737	SEC14L5	O43304	696 aa		12.32	□□□□□ -0.44
SMG1-213	ENST00000567737	PLG	P00747	810 aa	Predicted RBP	12.32	□□□□□ -0.44
SMG1-213	ENST00000567737	CSF3	P09919	207 aa		12.32	□□□□□ -0.44
SMG1-213	ENST00000567737	TPSB2	P20231	275 aa		12.32	□□□□□ -0.44
SMG1-213	ENST00000567737	PSMB1	P20618	241 aa	Known RBP	12.32	□□□□□ -0.44
SMG1-213	ENST00000567737	GALNS	P34059	522 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms