RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 CAMKMTQ7Z624 323 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 OR4N5Q8IXE1 308 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 RIMKLAQ8IXN7 391 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 GPALPP1Q8IXQ4 340 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 PGAM4Q8N0Y7 254 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 FAM26EQ8N5C1 309 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 DPP10Q8N608 796 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 POU5F2Q8N7G0 328 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 RBM15BQ8NDT2 890 aaKnown RBP12.47□□□□□ -0.41
CLK3-218ENST00000566926 MDS2Q8NDY4 140 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 VPS37AQ8NEZ2 397 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 OR9I1Q8NGQ6 314 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 SLC2A12Q8TD20 617 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 MCUR1Q96AQ8 359 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 HOPXQ9BPY8 73 aaPredicted RBP12.47□□□□□ -0.41
CLK3-218ENST00000566926 FAIM2Q9BWQ8 316 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 TRIM45Q9H8W5 580 aaPredicted RBP12.47□□□□□ -0.41
CLK3-218ENST00000566926 ATAD3AQ9NVI7 634 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 TAS2R1Q9NYW7 299 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 PRPF19Q9UMS4 504 aaKnown RBP12.47□□□□□ -0.41
CLK3-218ENST00000566926 NTNG1Q9Y2I2 539 aa12.47□□□□□ -0.41
CLK3-218ENST00000566926 DIDO1Q9BTC0 2240 aaKnown RBP12.47□□□□□ -0.41
CLK3-218ENST00000566926 C15orf38-AP3S2A0A0A6YYH1 394 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 MYOCOSA0A1B0GUC4 107 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 MRASO14807 208 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 AIM2O14862 343 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 ITGA10O75578 1167 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 DDAH2O95865 285 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 PGRP06401 933 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 SP1P08047 785 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 SLC35E2P0CK97 266 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 S100A3P33764 101 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 KIR3DL1P43629 444 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 SSR4P51571 173 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 NME5P56597 212 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 RAE1P78406 368 aaKnown RBP12.46□□□□□ -0.41
CLK3-218ENST00000566926 HEPACAMQ14CZ8 416 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 NDUFAF5Q5TEU4 345 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 C6orf163Q5TEZ5 329 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 ANXA8L1Q5VT79 327 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 REP15Q6BDI9 236 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 SPINK14Q6IE38 97 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 SLC25A25Q6KCM7 469 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 ARPINQ7Z6K5 226 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 OR4K14Q8NGD5 310 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 OR8J2Q8NGG1 315 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 THAP3Q8WTV1 239 aaPredicted RBP12.46□□□□□ -0.41
CLK3-218ENST00000566926 RCN3Q96D15 328 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 SCMH1Q96GD3 660 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 SENP5Q96HI0 755 aaPredicted RBP12.46□□□□□ -0.41
CLK3-218ENST00000566926 TSSK3Q96PN8 268 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 SIGLEC12Q96PQ1 595 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 FAM120CQ9NX05 1096 aaKnown RBP12.46□□□□□ -0.41
CLK3-218ENST00000566926 TEX10Q9NXF1 929 aaPredicted RBP12.46□□□□□ -0.41
CLK3-218ENST00000566926 ANKRD10Q9NXR5 420 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 ZNF223Q9UK11 482 aaPredicted RBP12.46□□□□□ -0.41
CLK3-218ENST00000566926 AP3M1Q9Y2T2 418 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 FLNCQ14315 2725 aa12.46□□□□□ -0.41
CLK3-218ENST00000566926 GLOD5A6NK44 160 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 SCAMP2O15127 329 aaKnown RBP12.45□□□□□ -0.42
CLK3-218ENST00000566926 MAN1A2O60476 641 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 TBX19O60806 448 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 PRKRAO75569 313 aaKnown RBP12.45□□□□□ -0.42
CLK3-218ENST00000566926 SLC25A12O75746 678 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 NEURL1O76050 574 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 DRD2P14416 443 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 CAPN3P20807 821 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 CPOXP36551 454 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 UQCRFS1P47985 274 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 CPA2P48052 419 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 CORO7P57737 925 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 RNF4P78317 190 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 MAPKAPK3Q16644 382 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 TRMT5Q32P41 509 aaKnown RBP12.45□□□□□ -0.42
CLK3-218ENST00000566926 FAM174BQ3ZCQ3 159 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 VPS26BQ4G0F5 336 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 TIGD2Q4W5G0 525 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 CPTPQ5TA50 214 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 CYP4Z2PQ8N1L4 340 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 PRR7Q8TB68 274 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLK3-218ENST00000566926 ZNF721Q8TF20 911 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 ASB15Q8WXK1 588 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 NR4A3Q92570 626 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 RIT1Q92963 219 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 PPWD1Q96BP3 646 aaKnown RBP12.45□□□□□ -0.42
CLK3-218ENST00000566926 FBXL20Q96IG2 436 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 TEX37Q96LM6 180 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 EBPLQ9BY08 206 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 REEP4Q9H6H4 257 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 SLC52A3Q9NQ40 469 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 KLHL1Q9NR64 748 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 EHD3Q9NZN3 535 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 MYOTQ9UBF9 498 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 KLF13Q9Y2Y9 288 aaPredicted RBP12.45□□□□□ -0.42
CLK3-218ENST00000566926 RRP15Q9Y3B9 282 aaKnown RBP12.45□□□□□ -0.42
CLK3-218ENST00000566926 PCDHA9Q9Y5H5 950 aa12.45□□□□□ -0.42
CLK3-218ENST00000566926 MYO7BQ6PIF6 2116 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 NINQ8N4C6 2090 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 OR6C76A6NM76 312 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms