RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 CRB2Q5IJ48 1285 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 ACER2Q5QJU3 275 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 C6orf163Q5TEZ5 329 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 ZNF468Q5VIY5 522 aaPredicted RBP7.56□□□□□ -1.2
CDH13-208ENST00000566333 ANXA8L1Q5VT79 327 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 TCTN3Q6NUS6 607 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 MFSD12Q6NUT3 480 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 SLC2A7Q6PXP3 512 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 LYPD8Q6UX82 237 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 CPLX4Q7Z7G2 160 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 RETREG3Q86VR2 466 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 MSRB3Q8IXL7 192 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 BEST3Q8N1M1 668 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 CLEC4FQ8N1N0 589 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 SLC5A8Q8N695 610 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 C17orf47Q8NEP4 570 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 OR4A15Q8NGL6 344 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 OR5AK3PQ8NH89 298 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 THAP3Q8WTV1 239 aaPredicted RBP7.56□□□□□ -1.2
CDH13-208ENST00000566333 GTF2H4Q92759 462 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 SPDL1Q96EA4 605 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 MS4A4EQ96PG1 132 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 BTBD9Q96Q07 612 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 OR52E6Q96RD3 313 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 GAL3ST4Q96RP7 486 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 LMF1Q96S06 567 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 CCT8L2Q96SF2 557 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 SLC25A23Q9BV35 468 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 DEFB126Q9BYW3 111 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 NXF5Q9H1B4 397 aaKnown RBP7.56□□□□□ -1.2
CDH13-208ENST00000566333 EPS8L2Q9H6S3 715 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 FOLH1BQ9HBA9 442 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 ZCCHC3Q9NUD5 404 aaKnown RBP7.56□□□□□ -1.2
CDH13-208ENST00000566333 GPATCH2Q9NW75 528 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 MYOTQ9UBF9 498 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 TUBD1Q9UJT1 453 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 TP53TG5Q9Y2B4 290 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 CSAG2Q9Y5P2 127 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 DNAJC13O75165 2243 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 ZNF407Q9C0G0 2248 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 HEATR5AQ86XA9 2040 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 TRBV5-3A0A0A0MS03 114 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 RNF103-CHMP3A0A140T963 221 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 CAPN14A8MX76 684 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 MKRN2OSH3BPM6 223 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 WWP2O00308 870 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 FBP2O00757 339 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 SLC22A2O15244 555 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 CFLARO15519 480 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 COQ9O75208 318 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 ITGA10O75578 1167 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 OR2J2O76002 312 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 ZFAND5O76080 213 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 ABCB1P08183 1280 aaPredicted RBP7.55□□□□□ -1.2
CDH13-208ENST00000566333 CT45A8P0DMV1 189 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 CT45A9P0DMV2 189 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 ACP2P11117 423 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 SOAT1P35610 550 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 MAN2A2P49641 1150 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 MVDP53602 400 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 KCNK10P57789 538 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 RPS26P62854 115 aaKnown RBP7.55□□□□□ -1.2
CDH13-208ENST00000566333 PSG6Q00889 435 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 ZNF155Q12901 538 aaPredicted RBP7.55□□□□□ -1.2
CDH13-208ENST00000566333 VPS26BQ4G0F5 336 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 CT45A2Q5DJT8 189 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 PAGE3Q5JUK9 113 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 LRIF1Q5T3J3 769 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 AGAP7PQ5VUJ5 663 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 SAXO2Q658L1 398 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 IGFL3Q6UXB1 125 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 ISLR2Q6UXK2 745 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 LINC00696Q6ZRV3 163 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 SLC29A4Q7RTT9 530 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 WDR53Q7Z5U6 358 aaPredicted RBP7.55□□□□□ -1.2
CDH13-208ENST00000566333 MTDHQ86UE4 582 aaKnown RBP7.55□□□□□ -1.2
CDH13-208ENST00000566333 RPS19BP1Q86WX3 136 aaKnown RBP7.55□□□□□ -1.2
CDH13-208ENST00000566333 ZNF227Q86WZ6 799 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 TREML1Q86YW5 311 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 FBXO30Q8TB52 745 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 ABHD17AQ96GS6 310 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 MAGED4Q96JG8 741 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 AGAP4Q96P64 663 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 RASL10BQ96S79 203 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 LMF2Q9BU23 707 aaKnown RBP7.55□□□□□ -1.2
CDH13-208ENST00000566333 CCDC106Q9BWC9 280 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 PAIP1Q9H074 479 aaKnown RBP7.55□□□□□ -1.2
CDH13-208ENST00000566333 RNF32Q9H0A6 362 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 ADNPQ9H2P0 1102 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 CDCP1Q9H5V8 836 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 EQTNQ9NQ60 294 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDH13-208ENST00000566333 SLC25A37Q9NYZ2 338 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 BCAP29Q9UHQ4 241 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 LHX6Q9UPM6 363 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 ARL2BPQ9Y2Y0 163 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 CAPN7Q9Y6W3 813 aa7.55□□□□□ -1.2
CDH13-208ENST00000566333 MED12Q93074 2177 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 A0A096LPI6 279 aa7.54□□□□□ -1.2
CDH13-208ENST00000566333 C2orf92A0A1B0GVN3 265 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms