RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TXLNGYQ9BZA5 131 aa16.75■□□□□ 0.27
USB1-213ENST00000566292 ACPTQ9BZG2 426 aa16.75■□□□□ 0.27
USB1-213ENST00000566292 KCNN3Q9UGI6 736 aa16.75■□□□□ 0.27
USB1-213ENST00000566292 MCM8Q9UJA3 840 aa16.75■□□□□ 0.27
USB1-213ENST00000566292 PSME2Q9UL46 239 aa16.75■□□□□ 0.27
USB1-213ENST00000566292 CFL2Q9Y281 166 aa16.75■□□□□ 0.27
USB1-213ENST00000566292 SLC6A5Q9Y345 797 aa16.75■□□□□ 0.27
USB1-213ENST00000566292 FAM47E-STBD1D6RA91 191 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 GNB5O14775 395 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 PCSK2P16519 638 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 NAGAP17050 411 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 KRT15P19012 456 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 PTPN6P29350 595 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 PTGDSP41222 190 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 EMDP50402 254 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 PRKAA2P54646 552 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 WNT3P56703 355 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 MRPS35P82673 323 aaKnown RBP16.74■□□□□ 0.27
USB1-213ENST00000566292 ACSF3Q4G176 576 aaPredicted RBP16.74■□□□□ 0.27
USB1-213ENST00000566292 EIPR1Q53HC9 387 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 TIGD3Q6B0B8 471 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 TMEM81Q6P7N7 255 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 LCA5Q86VQ0 697 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 IFT20Q8IY31 132 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 RELL2Q8NC24 303 aaPredicted RBP16.74■□□□□ 0.27
USB1-213ENST00000566292 METTL6Q8TCB7 284 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 MZB1Q8WU39 189 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 OMA1Q96E52 524 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 HSPBAP1Q96EW2 488 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 ZNF559Q9BR84 538 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 PRDM14Q9GZV8 571 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 EPB41L4BQ9H329 900 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 METTL7AQ9H8H3 244 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 UTS2RQ9UKP6 389 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 DLGAP4Q9Y2H0 992 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 L3MBTL1Q9Y468 752 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 ZNF780BQ9Y6R6 833 aa16.74■□□□□ 0.27
USB1-213ENST00000566292 ANKHD1Q8IWZ3 2542 aaKnown RBP16.74■□□□□ 0.27
USB1-213ENST00000566292 AHRRA9YTQ3 701 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 ACOX3O15254 700 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 PCDH7O60245 1069 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 ULK1O75385 1050 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 ESRRBO95718 433 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 EPPINO95925 133 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 IL3P08700 152 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 HMOX2P30519 316 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 HMGCS1Q01581 520 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 SLC29A2Q14542 456 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 DCST1Q5T197 706 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 VASNQ6EMK4 673 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 NUP54Q7Z3B4 507 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 CCDC116Q8IYX3 515 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 TNIP2Q8NFZ5 429 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 ZNF675Q8TD23 568 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 L3HYPDHQ96EM0 354 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 APIPQ96GX9 242 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 KCNA7Q96RP8 456 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 ANKRA2Q9H9E1 313 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 EHD3Q9NZN3 535 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 TIMM22Q9Y584 194 aa16.73■□□□□ 0.27
USB1-213ENST00000566292 C2orf72A6NCS6 295 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 HSPB2A8KAH6 182 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 KIF2AO00139 706 aaPredicted RBP16.72■□□□□ 0.27
USB1-213ENST00000566292 ICOSLGO75144 302 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 UGT2B11O75310 529 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 NME6O75414 186 aaPredicted RBP16.72■□□□□ 0.27
USB1-213ENST00000566292 PYGBP11216 843 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 BMP7P18075 431 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 DRD5P21918 477 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 CEACAM8P31997 349 aaPredicted RBP16.72■□□□□ 0.27
USB1-213ENST00000566292 PPICP45877 212 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 PLCXD2Q0VAA5 305 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 LCP2Q13094 533 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 MYBPHQ13203 477 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 SNTB1Q13884 538 aaKnown RBP16.72■□□□□ 0.27
USB1-213ENST00000566292 TOMM20Q15388 145 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 HSPB2Q16082 182 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 ZNF628Q5EBL2 1059 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 NHSL2Q5HYW2 709 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 WIPI1Q5MNZ9 446 aaPredicted RBP16.72■□□□□ 0.27
USB1-213ENST00000566292 CES4AQ5XG92 561 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 ANGPTL8Q6UXH0 198 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 SLC22A9Q8IVM8 553 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 CEP112Q8N8E3 955 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 GBP7Q8N8V2 638 aaPredicted RBP16.72■□□□□ 0.27
USB1-213ENST00000566292 OR1J4Q8NGS1 313 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 KIF18AQ8NI77 898 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 ACMSDQ8TDX5 336 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 C11orf24Q96F05 449 aaPredicted RBP16.72■□□□□ 0.27
USB1-213ENST00000566292 OSBPL11Q9BXB4 747 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 UGT2B28Q9BY64 529 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 GSTO2Q9H4Y5 243 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 GALNT9Q9HCQ5 603 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 PSMC3IPQ9P2W1 217 aaPredicted RBP16.72■□□□□ 0.27
USB1-213ENST00000566292 PRODH2Q9UF12 536 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 FETUBQ9UGM5 382 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 EMCNQ9ULC0 261 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 CAMK2AQ9UQM7 478 aa16.72■□□□□ 0.27
USB1-213ENST00000566292 AKAP6Q13023 2319 aa16.71■□□□□ 0.27
USB1-213ENST00000566292 HRNRQ86YZ3 2850 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms