RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ARPINQ7Z6K5 226 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 AQP12AQ8IXF9 295 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 LRRC25Q8N386 305 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-206ENST00000565990 TMEM102Q8N9M5 508 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-206ENST00000565990 OR14A16Q8NHC5 309 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 M1APQ8TC57 530 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF675Q8TD23 568 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 ELP5Q8TE02 316 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF721Q8TF20 911 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 DAZLQ92904 295 aaKnown RBP11.76□□□□□ -0.53
SF3B3-206ENST00000565990 CIDECQ96AQ7 238 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-206ENST00000565990 SENP5Q96HI0 755 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-206ENST00000565990 MARK4Q96L34 752 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 FER1L6-AS2Q96M78 137 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 DGAT2Q96PD7 388 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 GLIPR2Q9H4G4 154 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 CPNE5Q9HCH3 593 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 PNO1Q9NRX1 252 aaKnown RBP11.76□□□□□ -0.53
SF3B3-206ENST00000565990 CD300AQ9UGN4 299 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 FBXL4Q9UKA2 621 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 CLCA3PQ9Y6N3 262 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 LOC400499M0QZD8 3231 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 NSG1A0A0A6YYJ2 146 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 A0A1W2PRB8 838 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 A8MUA0 341 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 RNASET2O00584 256 aaKnown RBP11.75□□□□□ -0.53
SF3B3-206ENST00000565990 PLOD3O60568 738 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 NPPAP01160 153 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 CLPSP04118 112 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 IGKV3-11P04433 115 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 IFNA16P05015 189 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 PGRP06401 933 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 CD1EP15812 388 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 TNNI3P19429 210 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 S100A3P33764 101 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 PEX19P40855 299 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 KIR3DL1P43629 444 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 POLR2JP52435 117 aaKnown RBP11.75□□□□□ -0.53
SF3B3-206ENST00000565990 SLC26A5P58743 744 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 Q0VFX4 171 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 AIMP2Q13155 320 aaKnown RBP11.75□□□□□ -0.53
SF3B3-206ENST00000565990 ATP1A4Q13733 1029 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 EXT1Q16394 746 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 PGS1Q32NB8 556 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 SPANXN4Q5MJ08 99 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 ANXA8L1Q5VT79 327 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 FOXB2Q5VYV0 432 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 REP15Q6BDI9 236 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 H3F3CQ6NXT2 135 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 PAPD4Q6PIY7 484 aaKnown RBP11.75□□□□□ -0.53
SF3B3-206ENST00000565990 FKBP9P1Q75LS8 142 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 AMER2Q8N7J2 671 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 APCDD1LQ8NCL9 501 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 BHLHE22Q8NFJ8 381 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-206ENST00000565990 OR7G1Q8NGA0 311 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 OR9I1Q8NGQ6 314 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 OR1N1Q8NGS0 311 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 GOT1L1Q8NHS2 421 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-206ENST00000565990 DGCR14Q96DF8 476 aaKnown RBP11.75□□□□□ -0.53
SF3B3-206ENST00000565990 ELP4Q96EB1 424 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 ZBED6CLQ96FA7 236 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF597Q96LX8 424 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 BBS4Q96RK4 519 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 ZBTB18Q99592 522 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 MMP25Q9NPA2 562 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 ATP13A2Q9NQ11 1180 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 GIMAP4Q9NUV9 329 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 ARMC1Q9NVT9 282 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 GID8Q9NWU2 228 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 PTTG2Q9NZH5 202 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 MAT2BQ9NZL9 334 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 NTMQ9P121 344 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 TMEM181Q9P2C4 612 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 BTNL2Q9UIR0 455 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 ENTPD4Q9Y227 616 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 POLHQ9Y253 713 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 KCNMB2Q9Y691 235 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 AP4B1Q9Y6B7 739 aa11.75□□□□□ -0.53
SF3B3-206ENST00000565990 A0A087WV62 115 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 HRKO00198 91 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 OR10H2O60403 315 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 SEC24DO94855 1032 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 SERPINA7P05543 415 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 CT62P0C5K7 136 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 FCGR1AP12314 374 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 HSD17B1P14061 328 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 GSTT1P30711 240 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 NCBP2P52298 156 aaKnown RBP eCLIP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 DGKQP52824 942 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 RRADP55042 308 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 MANFP55145 182 aaKnown RBP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 MRPS22P82650 360 aaKnown RBP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 EEF1A2Q05639 463 aaKnown RBP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 LRRC74AQ0VAA2 488 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 RCAN2Q14206 197 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 TLR1Q15399 786 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 CNPY1Q3B7I2 92 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 FAM174BQ3ZCQ3 159 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 TRMT12Q53H54 448 aaKnown RBP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 FHL5Q5TD97 284 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms