RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CDC73Q6P1J9 531 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 RNF130Q86XS8 419 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 SPACA3Q8IXA5 215 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 PGAM4Q8N0Y7 254 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 TAGAPQ8N103 731 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 CLEC4FQ8N1N0 589 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 PIP4P2Q8N4L2 257 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 ZNF615Q8N8J6 731 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 NFAM1Q8NET5 270 aaPredicted RBP7.24□□□□□ -1.25
CDH1-208ENST00000565810 OR8J3Q8NGG0 315 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 OR52N2Q8NGI0 321 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 OR8K3Q8NH51 312 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 C16orf52Q8NHV5 167 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 NUBPLQ8TB37 319 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 PNPT1Q8TCS8 783 aaKnown RBP7.24□□□□□ -1.25
CDH1-208ENST00000565810 ADAMTS15Q8TE58 950 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 SLC9A6Q92581 669 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 JADE3Q92613 823 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 GAL3ST4Q96RP7 486 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 ECSITQ9BQ95 431 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 NUDT9Q9BW91 350 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 ACTRT3Q9BYD9 372 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 SEMA4CQ9C0C4 833 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 C1orf21Q9H246 121 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 ANKRA2Q9H9E1 313 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 NANOGQ9H9S0 305 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 FOLH1BQ9HBA9 442 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 EQTNQ9NQ60 294 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 RYDENQ9NUL5 291 aaKnown RBP7.24□□□□□ -1.25
CDH1-208ENST00000565810 THUMPD1Q9NXG2 353 aaKnown RBP7.24□□□□□ -1.25
CDH1-208ENST00000565810 ADA2Q9NZK5 511 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 ERVK-11Q9UQG0 969 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 HEMK1Q9Y5R4 338 aaPredicted RBP7.24□□□□□ -1.25
CDH1-208ENST00000565810 AHCTF1Q8WYP5 2266 aa7.24□□□□□ -1.25
CDH1-208ENST00000565810 SPTBN2O15020 2390 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 TRBV5-3A0A0A0MS03 114 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 ARGFXA6NJG6 315 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 A8MUI8 341 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 C1QTNF9BB2RNN3 333 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 DNAJA2O60884 412 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 C1QTNF9P0C862 333 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 ITGA3P26006 1051 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 PTPN6P29350 595 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 GABRA3P34903 492 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 PPICP45877 212 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 EMDP50402 254 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 NRG3P56975 720 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 MTPNP58546 118 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 RNF4P78317 190 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 PSPHP78330 225 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 GNA13Q14344 377 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 RGNQ15493 299 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 ZSCAN26Q16670 478 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 DEFB109BQ30KR1 87 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 DCAF10Q5QP82 559 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 MFSD12Q6NUT3 480 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 PROSER1Q86XN7 944 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 DEFB107AQ8IZN7 70 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 SLC5A8Q8N695 610 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 ZNF321PQ8N8H1 164 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 APCDD1LQ8NCL9 501 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 RBM15BQ8NDT2 890 aaKnown RBP7.23□□□□□ -1.25
CDH1-208ENST00000565810 C17orf47Q8NEP4 570 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 GPR151Q8TDV0 419 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 ELP5Q8TE02 316 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 XAGE5Q8WWM1 108 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 ZCCHC14Q8WYQ9 949 aaKnown RBP7.23□□□□□ -1.25
CDH1-208ENST00000565810 GIMAP5Q96F15 307 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 AURKBQ96GD4 344 aaPredicted RBP7.23□□□□□ -1.25
CDH1-208ENST00000565810 C16orf58Q96GQ5 468 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 THOC3Q96J01 351 aaKnown RBP7.23□□□□□ -1.25
CDH1-208ENST00000565810 LCORQ96JN0 433 aaPredicted RBP7.23□□□□□ -1.25
CDH1-208ENST00000565810 STACQ99469 402 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 CPPED1Q9BRF8 314 aaPredicted RBP7.23□□□□□ -1.25
CDH1-208ENST00000565810 MESP1Q9BRJ9 268 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 GPATCH1Q9BRR8 931 aaKnown RBP7.23□□□□□ -1.25
CDH1-208ENST00000565810 SLC39A3Q9BRY0 314 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 BTBD10Q9BSF8 475 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 YIPF4Q9BSR8 244 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 TMEM121BQ9BXQ6 578 aaPredicted RBP7.23□□□□□ -1.25
CDH1-208ENST00000565810 TRIM4Q9C037 500 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 WWTR1Q9GZV5 400 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 ING2Q9H160 280 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 EPS8L2Q9H6S3 715 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 Q9N2J8 555 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 SPAG4Q9NPE6 437 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 EXD2Q9NVH0 621 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 GPATCH2Q9NW75 528 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 GIN1Q9NXP7 522 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 SLC25A37Q9NYZ2 338 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 TEKT2Q9UIF3 430 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 MRTO4Q9UKD2 239 aaKnown RBP7.23□□□□□ -1.25
CDH1-208ENST00000565810 RAXQ9Y2V3 346 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 OR10H1Q9Y4A9 318 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 GMEB1Q9Y692 573 aa7.23□□□□□ -1.25
CDH1-208ENST00000565810 PTPRBP23467 1997 aa7.22□□□□□ -1.25
CDH1-208ENST00000565810 CELSR3Q9NYQ7 3312 aa7.22□□□□□ -1.25
CDH1-208ENST00000565810 FRG2CA6NGY1 282 aa7.22□□□□□ -1.25
CDH1-208ENST00000565810 C5orf58C9J3I9 102 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms