RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-210	ENST00000564409	VASN	Q6EMK4	673 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	TMEM64	Q6YI46	380 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	SPNS3	Q6ZMD2	512 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	RPS27L	Q71UM5	84 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	CDYL2	Q8N8U2	506 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	KIF18A	Q8NI77	898 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	UHMK1	Q8TAS1	419 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	ZNF675	Q8TD23	568 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	CCDC126	Q96EE4	140 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	L3HYPDH	Q96EM0	354 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	ZNF681	Q96N22	645 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	TIMP4	Q99727	224 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	PRDM14	Q9GZV8	571 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	METTL7A	Q9H8H3	244 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	TMEM216	Q9P0N5	145 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	MED13L	Q71F56	2210 aa		13.73	□□□□□ -0.21
SPG7-210	ENST00000564409	DOCK7	Q96N67	2140 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	SERTM1	A2A2V5	107 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	FRG2C	A6NGY1	282 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	SYT5	O00445	386 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	RIPK2	O43353	540 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	DLX3	O60479	287 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	LRAT	O95237	230 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	ACTL6A	O96019	429 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	IL2RA	P01589	272 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	TSPAN8	P19075	237 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	POU3F2	P20265	443 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	GCA	P28676	217 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	CEACAM8	P31997	349 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	PRKAA2	P54646	552 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	ACSM2A	Q08AH3	577 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	LCP2	Q13094	533 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	MYBPH	Q13203	477 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	HEPACAM	Q14CZ8	416 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	FBXL19-AS1	Q494R0	122 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	ACSF3	Q4G176	576 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	FNDC7	Q5VTL7	733 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	ACSM2B	Q68CK6	577 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	GALNT18	Q6P9A2	607 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	FAM111B	Q6SJ93	734 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	ARSK	Q6UWY0	536 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	OR1J4	Q8NGS1	313 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	METTL6	Q8TCB7	284 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	CNRIP1	Q96F85	164 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	GNRHR2	Q96P88	292 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	TMEM237	Q96Q45	408 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	GIMAP4	Q9NUV9	329 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	SIRT5	Q9NXA8	310 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	EHD3	Q9NZN3	535 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	DCDC2	Q9UHG0	476 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	UTS2R	Q9UKP6	389 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	TEP1	Q99973	2627 aa	Known RBP	13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	CSMD2	Q7Z408	3487 aa		13.72	□□□□□ -0.21
SPG7-210	ENST00000564409	GNG14	A0A1W2PPG7	69 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	OR6C70	A6NIJ9	312 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	CD8B2	A6NJW9	211 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	ZWINT	O95229	277 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	ESRRB	O95718	433 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	CBX7	O95931	251 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	PTPN6	P29350	595 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	ALDH9A1	P49189	494 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	EMD	P50402	254 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	PLCXD2	Q0VAA5	305 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	TESK1	Q15569	626 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	NSUN5P2	Q63ZY6	315 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	BICRAL	Q6AI39	1079 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	SCIMP	Q6UWF3	145 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	LIX1L	Q8IVB5	337 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	HGD	Q93099	445 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	TMCO6	Q96DC7	493 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	OMA1	Q96E52	524 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	BTBD9	Q96Q07	612 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	OSBPL11	Q9BXB4	747 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	ITPA	Q9BY32	194 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	STMN4	Q9H169	189 aa	Predicted RBP	13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	CALHM2	Q9HA72	323 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	ITGB1BP2	Q9UKP3	347 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	EXO1	Q9UQ84	846 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	DTX4	Q9Y2E6	619 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	DLGAP4	Q9Y2H0	992 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	WBP11	Q9Y2W2	641 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	PLLP	Q9Y342	182 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	L3MBTL1	Q9Y468	752 aa		13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-210	ENST00000564409	MPDZ	O75970	2070 aa		13.7	□□□□□ -0.22
SPG7-210	ENST00000564409	SNPH	O15079	494 aa		13.7	□□□□□ -0.22
SPG7-210	ENST00000564409	PCDH7	O60245	1069 aa		13.7	□□□□□ -0.22
SPG7-210	ENST00000564409	ICOSLG	O75144	302 aa		13.7	□□□□□ -0.22
SPG7-210	ENST00000564409	CBR3	O75828	277 aa		13.7	□□□□□ -0.22
SPG7-210	ENST00000564409	SLITRK5	O94991	958 aa		13.7	□□□□□ -0.22
SPG7-210	ENST00000564409	MPI	P34949	423 aa		13.7	□□□□□ -0.22
SPG7-210	ENST00000564409	ASCL1	P50553	236 aa		13.7	□□□□□ -0.22
SPG7-210	ENST00000564409	DLX5	P56178	289 aa		13.7	□□□□□ -0.22
SPG7-210	ENST00000564409	MRPS22	P82650	360 aa	Known RBP	13.7	□□□□□ -0.22
SPG7-210	ENST00000564409	EXOSC7	Q15024	291 aa	Known RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms