RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 FGF4P08620 206 aa28.25■■■□□ 2.11
CMTM4-204ENST00000563952 EMDP50402 254 aa28.25■■■□□ 2.11
CMTM4-204ENST00000563952 CEBPEQ15744 281 aa28.25■■■□□ 2.11
CMTM4-204ENST00000563952 RNF165Q6ZSG1 346 aa28.25■■■□□ 2.11
CMTM4-204ENST00000563952 IKBIPQ70UQ0 350 aa28.25■■■□□ 2.11
CMTM4-204ENST00000563952 MRGPRGQ86SM5 289 aa28.25■■■□□ 2.11
CMTM4-204ENST00000563952 CLYBLQ8N0X4 340 aa28.25■■■□□ 2.11
CMTM4-204ENST00000563952 ZIM3Q96PE6 472 aa28.25■■■□□ 2.11
CMTM4-204ENST00000563952 WBP11Q9Y2W2 641 aaKnown RBP28.25■■■□□ 2.11
CMTM4-204ENST00000563952 BCAS2O75934 225 aaPredicted RBP28.24■■■□□ 2.11
CMTM4-204ENST00000563952 JUNP05412 331 aaKnown RBP28.24■■■□□ 2.11
CMTM4-204ENST00000563952 CELA3AP09093 270 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 TACR1P25103 407 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 ETV4P43268 484 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 NCBP2P52298 156 aaKnown RBP eCLIP28.24■■■□□ 2.11
CMTM4-204ENST00000563952 RPL38P63173 70 aaKnown RBP28.24■■■□□ 2.11
CMTM4-204ENST00000563952 ADORA2A-AS1P86434 159 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 HYAL4Q2M3T9 481 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 GALNTL6Q49A17 601 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 BICRALQ6AI39 1079 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 RPTNQ6XPR3 784 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 NCCRP1Q6ZVX7 275 aaPredicted RBP28.24■■■□□ 2.11
CMTM4-204ENST00000563952 SPPL2AQ8TCT8 520 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 GFM2Q969S9 779 aaKnown RBP28.24■■■□□ 2.11
CMTM4-204ENST00000563952 ERP27Q96DN0 273 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 HSPBAP1Q96EW2 488 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 PKNOX2Q96KN3 472 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 EGLN2Q96KS0 407 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 ZFP64Q9NPA5 681 aa28.24■■■□□ 2.11
CMTM4-204ENST00000563952 EXO1Q9UQ84 846 aaKnown RBP28.24■■■□□ 2.11
CMTM4-204ENST00000563952 MYO1GB0I1T2 1018 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 NPIPB8E9PQR5 432 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 PIP5K1BO14986 540 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 NME6O75414 186 aaPredicted RBP28.23■■■□□ 2.11
CMTM4-204ENST00000563952 DCAF7P61962 342 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 RPP38P78345 283 aaKnown RBP28.23■■■□□ 2.11
CMTM4-204ENST00000563952 PLCXD2Q0VAA5 305 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 UGT3A2Q3SY77 523 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 EXOC3L1Q86VI1 746 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 NUDCD3Q8IVD9 361 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 PPP1R14CQ8TAE6 165 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 OMA1Q96E52 524 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 LDAHQ9H6V9 325 aa28.23■■■□□ 2.11
CMTM4-204ENST00000563952 NINQ8N4C6 2090 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 LRRC3CA6NJW4 275 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 LSM1O15116 133 aaKnown RBP28.22■■■□□ 2.11
CMTM4-204ENST00000563952 ACOX3O15254 700 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 PPM1BO75688 479 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 ABCB1P08183 1280 aaPredicted RBP28.22■■■□□ 2.11
CMTM4-204ENST00000563952 RFPL3SP0C7P2 107 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 DRD5P21918 477 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 NTSP30990 170 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 ARRB2P32121 409 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 SERPINB5P36952 375 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 PPICP45877 212 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 SLC10A1Q14973 349 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 TBCELQ5QJ74 424 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 NAV2Q8IVL1 2488 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 HOMEZQ8IX15 550 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 ZNF808Q8N4W9 903 aaPredicted RBP28.22■■■□□ 2.11
CMTM4-204ENST00000563952 OR7G2Q8NG99 324 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 ZNF597Q96LX8 424 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 RILPQ96NA2 401 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 ZNF703Q9H7S9 590 aaPredicted RBP28.22■■■□□ 2.11
CMTM4-204ENST00000563952 TAS2R7Q9NYW3 318 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 ZNF407Q9C0G0 2248 aa28.22■■■□□ 2.11
CMTM4-204ENST00000563952 WDR91A4D1P6 747 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 NPIPA2E9PIF3 369 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 NPIPA3F8WFD2 350 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 IGHG3P01860 377 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 SERPINB4P48594 390 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 SMSP52788 366 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 RFTN2Q52LD8 501 aaPredicted RBP28.21■■■□□ 2.11
CMTM4-204ENST00000563952 TMEM198Q66K66 360 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 TRILQ7L0X0 811 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 EID3Q8N140 333 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 TSSK3Q96PN8 268 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 SECISBP2Q96T21 854 aaKnown RBP28.21■■■□□ 2.11
CMTM4-204ENST00000563952 CCT7Q99832 543 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 EXO5Q9H790 373 aa28.21■■■□□ 2.11
CMTM4-204ENST00000563952 NCKAP5O14513 1909 aa28.2■■■□□ 2.11
CMTM4-204ENST00000563952 ANKRD33BA6NCL7 494 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 FRG2CA6NGY1 282 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 E9PLN8 166 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 AKAP10O43572 662 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 PLOD3O60568 738 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 NAGAP17050 411 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 SDC1P18827 310 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 ZNF787Q6DD87 383 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 DESI1Q6ICB0 168 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 ANKRD26P1Q6NSI1 321 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 TMEM107Q6UX40 140 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 CLHC1Q8NHS4 586 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 FCRL1Q96LA6 429 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 VKORC1Q9BQB6 163 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 ANGPTL4Q9BY76 406 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 GLIPR2Q9H4G4 154 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 SSU72Q9NP77 194 aaKnown RBP28.2■■■□□ 2.1
CMTM4-204ENST00000563952 B4GALT7Q9UBV7 327 aa28.2■■■□□ 2.1
CMTM4-204ENST00000563952 ZDHHC2Q9UIJ5 367 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms