RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 HNRNPRO43390 633 aaKnown RBP20.48■□□□□ 0.87
LINC01960-201ENST00000563759 CBX7O95931 251 aa20.48■□□□□ 0.87
LINC01960-201ENST00000563759 ZGLP1P0C6A0 271 aa20.48■□□□□ 0.87
LINC01960-201ENST00000563759 JMJD7P0C870 316 aa20.48■□□□□ 0.87
LINC01960-201ENST00000563759 PTDSS1P48651 473 aaKnown RBP20.48■□□□□ 0.87
LINC01960-201ENST00000563759 MAN2A2P49641 1150 aa20.48■□□□□ 0.87
LINC01960-201ENST00000563759 ZNF155Q12901 538 aaPredicted RBP20.48■□□□□ 0.87
LINC01960-201ENST00000563759 GNA13Q14344 377 aa20.48■□□□□ 0.87
LINC01960-201ENST00000563759 RPS26P11Q5JNZ5 115 aaPredicted RBP20.48■□□□□ 0.87
LINC01960-201ENST00000563759 C16orf62Q7Z3J2 963 aa20.48■□□□□ 0.87
LINC01960-201ENST00000563759 PACS2Q86VP3 889 aa20.48■□□□□ 0.87
LINC01960-201ENST00000563759 OR10Q1Q8NGQ4 319 aa20.48■□□□□ 0.87
LINC01960-201ENST00000563759 ZNF578Q96N58 590 aaPredicted RBP20.48■□□□□ 0.87
LINC01960-201ENST00000563759 C17orf105B2RV13 164 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 DYRK3O43781 588 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 AGR2O95994 175 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 MT-ND1P03886 318 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 OPN1SWP03999 348 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 KLK3P07288 261 aaPredicted RBP20.47■□□□□ 0.87
LINC01960-201ENST00000563759 RAP2AP10114 183 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 GALNSP34059 522 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 CLCN2P51788 898 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 CRISP3P54108 245 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 PCBP3P57721 371 aaKnown RBP20.47■□□□□ 0.87
LINC01960-201ENST00000563759 MYBPC3Q14896 1274 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 SYPL1Q16563 259 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 HES3Q5TGS1 186 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 LRRC74BQ6ZQY2 392 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 CCDC80Q76M96 950 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 PATL1Q86TB9 770 aaKnown RBP20.47■□□□□ 0.87
LINC01960-201ENST00000563759 LAPTM4BQ86VI4 370 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 CDRT4Q8N9R6 151 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 SLC16A11Q8NCK7 471 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 LRTOMTQ8WZ04 291 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 TPD52L3Q96J77 140 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 PKP2Q99959 881 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 EXD2Q9NVH0 621 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 ERVK-19Q9WJR5 959 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 ZNF451Q9Y4E5 1061 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 WDFY3Q8IZQ1 3526 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 TCRBV16S1A1N1A0A5B0 115 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 SUV39H1O43463 412 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 GCM2O75603 506 aaPredicted RBP20.47■□□□□ 0.87
LINC01960-201ENST00000563759 IFNA14P01570 189 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 FCGR1AP12314 374 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 SSTR4P31391 388 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 EFNA3P52797 238 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 CRYBA2P53672 197 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 GPAT3Q53EU6 434 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 CYBRD1Q53TN4 286 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 CBLL1Q75N03 491 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 EIF3MQ7L2H7 374 aaKnown RBP20.47■□□□□ 0.87
LINC01960-201ENST00000563759 OVCH1Q7RTY7 1134 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 LILRA2Q8N149 483 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 METTL25Q8N6Q8 603 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 PYURFQ96I23 114 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 SOX17Q9H6I2 414 aaPredicted RBP20.47■□□□□ 0.87
LINC01960-201ENST00000563759 MAGIXQ9H6Y5 334 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 PISDQ9UG56 409 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 ZNF639Q9UID6 485 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 RIMS3Q9UJD0 308 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 B3GALT1Q9Y5Z6 326 aa20.47■□□□□ 0.87
LINC01960-201ENST00000563759 HRKO00198 91 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 PRAMEF2O60811 474 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 PDE9AO76083 593 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 PGM3O95394 542 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 CDK4P11802 303 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 ETV5P41161 510 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 HPCAP84074 193 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 MLIPQ5VWP3 458 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 ZCCHC12Q6PEW1 402 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 FKBP9P1Q75LS8 142 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 ANKFN1Q8N957 763 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 PAPD5Q8NDF8 572 aaKnown RBP20.46■□□□□ 0.87
LINC01960-201ENST00000563759 CDS1Q92903 461 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 FKBP10Q96AY3 582 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 HSH2DQ96JZ2 352 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 LRFN5Q96NI6 719 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 TREX2Q9BQ50 279 aaPredicted RBP20.46■□□□□ 0.87
LINC01960-201ENST00000563759 CHID1Q9BWS9 393 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 YY1AP1Q9H869 796 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 KCNE3Q9Y6H6 103 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 CLCA3PQ9Y6N3 262 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 FAM186AA6NE01 2351 aa20.46■□□□□ 0.87
LINC01960-201ENST00000563759 PRAMEF27A3QJZ7 478 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 SYNDIG1LA6NDD5 238 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 A8MUA0 341 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 M0QX08 132 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 ONECUT2O95948 504 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 RECKO95980 971 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 ALOX5P09917 674 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 ACP2P11117 423 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 S1PR1P21453 382 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 FOXL2P58012 376 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 FUT5Q11128 374 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 TRIP10Q15642 601 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 ELAVL1Q15717 326 aaKnown RBP20.45■□□□□ 0.86
LINC01960-201ENST00000563759 NKG7Q16617 165 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 DUSP5Q16690 384 aa20.45■□□□□ 0.86
LINC01960-201ENST00000563759 CRB2Q5IJ48 1285 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms