RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 NTMQ9P121 344 aa17.45■□□□□ 0.38
RAB40C-207ENST00000563109 NDUFAF1Q9Y375 327 aa17.45■□□□□ 0.38
RAB40C-207ENST00000563109 TPRP12270 2363 aaKnown RBP17.45■□□□□ 0.38
RAB40C-207ENST00000563109 BBIP1A8MTZ0 92 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 PSMG1O95456 288 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 KRT16P08779 473 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 TRPC1P48995 793 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 MLF1P58340 268 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 KCNAB2Q13303 367 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 MFAP5Q13361 173 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 MMEL1Q495T6 779 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 ACER2Q5QJU3 275 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 LINC00696Q6ZRV3 163 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 ZNF621Q6ZSS3 439 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 TAGAPQ8N103 731 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 C17orf47Q8NEP4 570 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 TM9SF4Q92544 642 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 LRRC37BQ96QE4 947 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 SLC35A5Q9BS91 424 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 MYLK2Q9H1R3 596 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 ZNF552Q9H707 407 aaPredicted RBP17.44■□□□□ 0.38
RAB40C-207ENST00000563109 MYOTQ9UBF9 498 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 TUBD1Q9UJT1 453 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 FAF1Q9UNN5 650 aaPredicted RBP17.44■□□□□ 0.38
RAB40C-207ENST00000563109 PCDHGB7Q9Y5F8 929 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 CELSR3Q9NYQ7 3312 aa17.44■□□□□ 0.38
RAB40C-207ENST00000563109 A0A096LPI6 279 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 TTC36A6NLP5 189 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 WWP2O00308 870 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 ERN1O75460 977 aaKnown RBP17.43■□□□□ 0.38
RAB40C-207ENST00000563109 KCNH1O95259 989 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 CASRP41180 1078 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 CDKN2CP42773 168 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 NRG3P56975 720 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 PSPHP78330 225 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 GAB1Q13480 694 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 CYLC2Q14093 348 aaPredicted RBP17.43■□□□□ 0.38
RAB40C-207ENST00000563109 LINC00303Q3SY05 128 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 ZCCHC12Q6PEW1 402 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 ANGPTL8Q6UXH0 198 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 SNX32Q86XE0 403 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 ARMC10Q8N2F6 343 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 CDRT4Q8N9R6 151 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 DNAJB8Q8NHS0 232 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 JADE3Q92613 823 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 TTC9Q92623 222 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 GTF2H4Q92759 462 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 TP53INP1Q96A56 240 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 SLC35G5Q96KT7 338 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 VSTM2LQ96N03 204 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 SMAD5Q99717 465 aaKnown RBP17.43■□□□□ 0.38
RAB40C-207ENST00000563109 CCDC106Q9BWC9 280 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 LIN28AQ9H9Z2 209 aaKnown RBP17.43■□□□□ 0.38
RAB40C-207ENST00000563109 SERHLQ9NQF3 203 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 RYDENQ9NUL5 291 aaKnown RBP17.43■□□□□ 0.38
RAB40C-207ENST00000563109 DTX4Q9Y2E6 619 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 YARS2Q9Y2Z4 477 aaKnown RBP17.43■□□□□ 0.38
RAB40C-207ENST00000563109 ZNF451Q9Y4E5 1061 aa17.43■□□□□ 0.38
RAB40C-207ENST00000563109 ASPDHA6ND91 283 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 FRG2CA6NGY1 282 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 ERVH48-1M5A8F1 160 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 ITGA10O75578 1167 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 OR2J2O76002 312 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 GSNP06396 782 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 FAM87AP0C7U9 286 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 ZCCHC18P0CG32 403 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 PPICP45877 212 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 SSR4P51571 173 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 NR0B1P51843 470 aaKnown RBP17.42■□□□□ 0.38
RAB40C-207ENST00000563109 STX5Q13190 355 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 LASP1Q14847 261 aaKnown RBP17.42■□□□□ 0.38
RAB40C-207ENST00000563109 TLR1Q15399 786 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 NNATQ16517 81 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 MFSD12Q6NUT3 480 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 BEST3Q8N1M1 668 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 SLC15A4Q8N697 577 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 ZNF441Q8N8Z8 693 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 C9orf43Q8TAL5 461 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-207ENST00000563109 ADIPOR1Q96A54 375 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 LCORQ96JN0 433 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-207ENST00000563109 BTBD9Q96Q07 612 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 LMF1Q96S06 567 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 NPAS2Q99743 824 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 TRIM4Q9C037 500 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 SLC52A3Q9NQ40 469 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 STMN3Q9NZ72 180 aa17.42■□□□□ 0.38
RAB40C-207ENST00000563109 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 TMEM200CA6NKL6 621 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 CDK2AP1O14519 115 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 ACOX3O15254 700 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 KRT75O95678 551 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 HMGN2P05204 90 aaKnown RBP17.41■□□□□ 0.38
RAB40C-207ENST00000563109 ALOX5P09917 674 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 CD1EP15812 388 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 DRD5P21918 477 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 PIGGQ5H8A4 983 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 COQ5Q5HYK3 327 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 OPN5Q6U736 354 aa17.41■□□□□ 0.38
RAB40C-207ENST00000563109 C16orf47Q6ZP98 133 aaPredicted RBP17.41■□□□□ 0.38
RAB40C-207ENST00000563109 C6orf120Q7Z4R8 191 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms