RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 MFSD2BA6NFX1 497 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 SAP18O00422 153 aaKnown RBP2.12□□□□□ -2.07
CHD9-207ENST00000562806 HSF2BPO75031 334 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 TSC22D2O75157 780 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 ECDO95905 644 aaPredicted RBP2.12□□□□□ -2.07
CHD9-207ENST00000562806 PNPP00491 289 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 HOXB7P09629 217 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 LAMP1P11279 417 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 TKTL1P51854 596 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 UCP2P55851 309 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 NME5P56597 212 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 PPP1R8Q12972 351 aaKnown RBP2.12□□□□□ -2.07
CHD9-207ENST00000562806 ASAH1Q13510 395 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 SLC10A1Q14973 349 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 ISXQ2M1V0 245 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 ZNF674Q2M3X9 581 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 QRICH1Q2TAL8 776 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 SLC39A12Q504Y0 691 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 PAGE2BQ5JRK9 111 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 MEDAGQ5VYS4 303 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 OLFM4Q6UX06 510 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 TSEN54Q7Z6J9 526 aaKnown RBP2.12□□□□□ -2.07
CHD9-207ENST00000562806 ZNF410Q86VK4 478 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 SLC22A16Q86VW1 577 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 PEX5LQ8IYB4 626 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 CCDC170Q8IYT3 715 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 TMEM37Q8WXS4 190 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 MRPL53Q96EL3 112 aaKnown RBP2.12□□□□□ -2.07
CHD9-207ENST00000562806 ZIM3Q96PE6 472 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 KIR2DL4Q99706 377 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 NACA2Q9H009 215 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 OPN3Q9H1Y3 402 aaPredicted RBP2.12□□□□□ -2.07
CHD9-207ENST00000562806 TSPY26PQ9H489 355 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 NRN1Q9NPD7 142 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 HPS4Q9NQG7 708 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 EXOSC3Q9NQT5 275 aaKnown RBP2.12□□□□□ -2.07
CHD9-207ENST00000562806 LHX3Q9UBR4 397 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 Q9UF83 564 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 KLHL21Q9UJP4 597 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 NOL7Q9UMY1 257 aaKnown RBP2.12□□□□□ -2.07
CHD9-207ENST00000562806 GRIN2DO15399 1336 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 RALGAPA1Q6GYQ0 2036 aa2.12□□□□□ -2.07
CHD9-207ENST00000562806 SMIM30A4D0T7 59 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 TMEM110-MUSTN1A8MSY1 372 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 G3V3Y1 287 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 HDAC3O15379 428 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 SERF1AO75920 110 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 GIG44P09565 113 aaPredicted RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 P0C879 139 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 MGMTP16455 207 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 UGT1A6P19224 532 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 RPA1P27694 616 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 HMGCLP35914 325 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 MAGEA4P43358 317 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 NT5C2P49902 561 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 KRTAP12-2P59991 146 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 NOP14P78316 857 aaKnown RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 EIF2B1Q14232 305 aaKnown RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 RFTN1Q14699 578 aaPredicted RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 ZIC1Q15915 447 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 ZNF79Q15937 498 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 PKN2Q16513 984 aaKnown RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 PAN3Q58A45 887 aaKnown RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 TCHHL1Q5QJ38 904 aaPredicted RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 SLC22A10Q63ZE4 541 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 DPY19L2P2Q6ZN68 376 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 TMEM110Q86TL2 294 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 UBQLNLQ8IYU4 475 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 OR13F1Q8NGS4 319 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 ZNF671Q8TAW3 534 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 FNDC8Q8TC99 324 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 P3H4Q92791 437 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 DLX4Q92988 240 aaPredicted RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 CASD1Q96PB1 797 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 ACCSQ96QU6 501 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 TEX13BQ9BXU2 312 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 TEX13AQ9BXU3 409 aaPredicted RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 ABCG4Q9H172 646 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 PRMT8Q9NR22 394 aaPredicted RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 TRIM10Q9UDY6 481 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 PRODH2Q9UF12 536 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 TRMT6Q9UJA5 497 aaKnown RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 PURGQ9UJV8 347 aaKnown RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 PLEKHA6Q9Y2H5 1048 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 ZNF175Q9Y473 711 aa2.11□□□□□ -2.07
CHD9-207ENST00000562806 MTF2Q9Y483 593 aaPredicted RBP2.11□□□□□ -2.07
CHD9-207ENST00000562806 ZNF646O15015 1829 aaPredicted RBP2.1□□□□□ -2.07
CHD9-207ENST00000562806 A0A0J9YVX5 310 aa2.1□□□□□ -2.07
CHD9-207ENST00000562806 LRIT2A6NDA9 550 aa2.1□□□□□ -2.07
CHD9-207ENST00000562806 EPOPA6NHQ4 379 aa2.1□□□□□ -2.07
CHD9-207ENST00000562806 SLC17A2O00624 439 aa2.1□□□□□ -2.07
CHD9-207ENST00000562806 CDX4O14627 284 aaPredicted RBP2.1□□□□□ -2.07
CHD9-207ENST00000562806 NUDT21O43809 227 aaKnown RBP2.1□□□□□ -2.07
CHD9-207ENST00000562806 GOSR1O95249 250 aa2.1□□□□□ -2.07
CHD9-207ENST00000562806 SYNGR4O95473 234 aa2.1□□□□□ -2.07
CHD9-207ENST00000562806 OAS1P00973 400 aaKnown RBP2.1□□□□□ -2.07
CHD9-207ENST00000562806 ZP3P21754 424 aa2.1□□□□□ -2.07
CHD9-207ENST00000562806 ZBTB25P24278 435 aa2.1□□□□□ -2.07
CHD9-207ENST00000562806 TMOD1P28289 359 aa2.1□□□□□ -2.07
CHD9-207ENST00000562806 PTPN4P29074 926 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms