RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 GIN1Q9NXP7 522 aa9.21□□□□□ -0.93
SMG1-205ENST00000561947 CALML5Q9NZT1 146 aa9.21□□□□□ -0.93
SMG1-205ENST00000561947 NTMQ9P121 344 aa9.21□□□□□ -0.93
SMG1-205ENST00000561947 SYT5O00445 386 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 DNAJB6O75190 326 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 SLITRK5O94991 958 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 ALPPP05187 535 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 LCKP06239 509 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 ALOX12P18054 663 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 IGFBP4P22692 258 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 POU1F1P28069 291 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 TLX1P31314 330 aaPredicted RBP9.21□□□□□ -0.94
SMG1-205ENST00000561947 CNR2P34972 360 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 NUDT6P53370 316 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 SIM1P81133 766 aaPredicted RBP9.21□□□□□ -0.94
SMG1-205ENST00000561947 ILKQ13418 452 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 TBCEQ15813 527 aaPredicted RBP9.21□□□□□ -0.94
SMG1-205ENST00000561947 PODNL1Q6PEZ8 512 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 FAM111BQ6SJ93 734 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 TAF8Q7Z7C8 310 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 P2RY8Q86VZ1 359 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 SLC7A13Q8TCU3 470 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 MS4A4EQ96PG1 132 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 QRSL1Q9H0R6 528 aaKnown RBP9.21□□□□□ -0.94
SMG1-205ENST00000561947 LYRM4Q9HD34 91 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 AMBNQ9NP70 447 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 MAN2C1Q9NTJ4 1040 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 HRASLS2Q9NWW9 162 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 WSB2Q9NYS7 404 aaPredicted RBP9.21□□□□□ -0.94
SMG1-205ENST00000561947 SLC6A14Q9UN76 642 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 SLC22A7Q9Y694 548 aa9.21□□□□□ -0.94
SMG1-205ENST00000561947 SH3D21A4FU49 640 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 SLC22A1O15245 554 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 ZSCAN9O15535 394 aaPredicted RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 MBTPS2O43462 519 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 INHBBP09529 407 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 POU3F3P20264 500 aaPredicted RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 CALRP27797 417 aaKnown RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 C21orf33P30042 268 aaPredicted RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 NUDT1P36639 197 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 OLR1P78380 273 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 CHRNEQ04844 493 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 SMAD4Q13485 552 aaKnown RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 C6orf132Q5T0Z8 1188 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 ATAD3BQ5T9A4 648 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 SLX4IPQ5VYV7 408 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 MFSD12Q6NUT3 480 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 CDC73Q6P1J9 531 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 USP53Q70EK8 1073 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 C16orf62Q7Z3J2 963 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 LINC00471Q8N535 108 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 FAM46DQ8NEK8 389 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 ADAMTS15Q8TE58 950 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 NECTIN3Q9NQS3 549 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 SLC2A4RGQ9NR83 387 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 TMEM74BQ9NUR3 256 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 DNAAF2Q9NVR5 837 aaKnown RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 GPR83Q9NYM4 423 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 SELENONQ9NZV5 590 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 MRPS2Q9Y399 296 aaKnown RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 TDRD6O60522 2096 aaKnown RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 SCN2AQ99250 2005 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 ZNF860A6NHJ4 632 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 NME6O75414 186 aaPredicted RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 CLPXO76031 633 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 EIF2S1P05198 315 aaKnown RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 CHRNB1P11230 501 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 SRFP11831 508 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 CTSEP14091 401 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 TGFBR2P37173 567 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 MOGQ16653 247 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 FAM214AQ32MH5 1076 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 ZNF311Q5JNZ3 666 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 AP1ARQ63HQ0 302 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 HEPHL1Q6MZM0 1159 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 PTCHD4Q6ZW05 846 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 SYT13Q7L8C5 426 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 CROCCP3Q8IVE0 287 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 OR4N5Q8IXE1 308 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 OR2L13Q8N349 312 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 ZNF655Q8N720 491 aaPredicted RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 COL26A1Q96A83 441 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 SLC35A4Q96G79 324 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 ARHGDIGQ99819 225 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 ITPAQ9BY32 194 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 POLR2J3Q9H1A7 115 aaKnown RBP9.2□□□□□ -0.94
SMG1-205ENST00000561947 C11orf16Q9NQ32 467 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 CLN6Q9NWW5 311 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 NDOR1Q9UHB4 597 aa9.2□□□□□ -0.94
SMG1-205ENST00000561947 A0A1W2PPC4 97 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 OR5K3A6NET4 321 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 DUXAA6NLW8 204 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 TLR4O00206 839 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 SOX14O95416 240 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 AGR2O95994 175 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 STSP08842 583 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 CPMP14384 443 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 ALDH6A1Q02252 535 aaKnown RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 TARDBPQ13148 414 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMG1-205ENST00000561947 C1orf61Q13536 156 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms