RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 CHMP2BQ9UQN3 213 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 RCE1Q9Y256 329 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 PLLPQ9Y342 182 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SIRT4Q9Y6E7 314 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 MYH11P35749 1972 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 MGAM2Q2M2H8 2515 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ZANQ9Y493 2812 aa3□□□□□ -1.93
SPG11-225ENST00000561391 GOLGA8QA0A0J9YX86 632 aa3□□□□□ -1.93
SPG11-225ENST00000561391 TCRBV7S3A2A0A539 114 aa3□□□□□ -1.93
SPG11-225ENST00000561391 GOLGA8OA6NCC3 632 aa3□□□□□ -1.93
SPG11-225ENST00000561391 A6NNC1 897 aa3□□□□□ -1.93
SPG11-225ENST00000561391 TRIM49D1C9J1S8 452 aa3□□□□□ -1.93
SPG11-225ENST00000561391 GOLGA8NF8WBI6 632 aa3□□□□□ -1.93
SPG11-225ENST00000561391 SLCO1B7G3V0H7 640 aa3□□□□□ -1.93
SPG11-225ENST00000561391 CACNB4O00305 520 aaPredicted RBP3□□□□□ -1.93
SPG11-225ENST00000561391 TRAFD1O14545 582 aaPredicted RBP3□□□□□ -1.93
SPG11-225ENST00000561391 ADAM10O14672 748 aa3□□□□□ -1.93
SPG11-225ENST00000561391 DSCR3O14972 297 aa3□□□□□ -1.93
SPG11-225ENST00000561391 KLK8O60259 260 aa3□□□□□ -1.93
SPG11-225ENST00000561391 SNAP91O60641 907 aa3□□□□□ -1.93
SPG11-225ENST00000561391 EDF1O60869 148 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 ALOX12BO75342 701 aa3□□□□□ -1.93
SPG11-225ENST00000561391 JCHAINP01591 159 aa3□□□□□ -1.93
SPG11-225ENST00000561391 IGLV3-25P01717 112 aa3□□□□□ -1.93
SPG11-225ENST00000561391 CRYABP02511 175 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 TK1P04183 234 aa3□□□□□ -1.93
SPG11-225ENST00000561391 FYNP06241 537 aa3□□□□□ -1.93
SPG11-225ENST00000561391 RAB40ALP0C0E4 278 aa3□□□□□ -1.93
SPG11-225ENST00000561391 RFPL3SP0C7P2 107 aa3□□□□□ -1.93
SPG11-225ENST00000561391 PVRP15151 417 aa3□□□□□ -1.93
SPG11-225ENST00000561391 EZRP15311 586 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 FOLR1P15328 257 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ABOP16442 354 aa3□□□□□ -1.93
SPG11-225ENST00000561391 PTPN3P26045 913 aa3□□□□□ -1.93
SPG11-225ENST00000561391 GCAP28676 217 aa3□□□□□ -1.93
SPG11-225ENST00000561391 TYK2P29597 1187 aa3□□□□□ -1.93
SPG11-225ENST00000561391 SERPINB5P36952 375 aa3□□□□□ -1.93
SPG11-225ENST00000561391 SLC26A3P40879 764 aa3□□□□□ -1.93
SPG11-225ENST00000561391 GNPDA1P46926 289 aa3□□□□□ -1.93
SPG11-225ENST00000561391 SERPINB8P50452 374 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ZNF84P51523 738 aa3□□□□□ -1.93
SPG11-225ENST00000561391 PLK1P53350 603 aa3□□□□□ -1.93
SPG11-225ENST00000561391 CSE1LP55060 971 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 NAA20P61599 178 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ARG2P78540 354 aa3□□□□□ -1.93
SPG11-225ENST00000561391 PMP22Q01453 160 aa3□□□□□ -1.93
SPG11-225ENST00000561391 WASHC5Q12768 1159 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ILF3Q12906 894 aaKnown RBP eCLIP3□□□□□ -1.93
SPG11-225ENST00000561391 BNIP1Q12981 228 aa3□□□□□ -1.93
SPG11-225ENST00000561391 STX3Q13277 289 aa3□□□□□ -1.93
SPG11-225ENST00000561391 EIF4EBP2Q13542 120 aaPredicted RBP3□□□□□ -1.93
SPG11-225ENST00000561391 RFTN1Q14699 578 aaPredicted RBP3□□□□□ -1.93
SPG11-225ENST00000561391 FASTKD3Q14CZ7 662 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 TMEM95Q3KNT9 176 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ARL13AQ5H913 290 aaPredicted RBP3□□□□□ -1.93
SPG11-225ENST00000561391 PLEKHS1Q5SXH7 462 aa3□□□□□ -1.93
SPG11-225ENST00000561391 MARC1Q5VT66 337 aa3□□□□□ -1.93
SPG11-225ENST00000561391 METTL21CQ5VZV1 264 aa3□□□□□ -1.93
SPG11-225ENST00000561391 PDPK2PQ6A1A2 396 aa3□□□□□ -1.93
SPG11-225ENST00000561391 RWDD4Q6NW29 188 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 TMEM88Q6PEY1 159 aa3□□□□□ -1.93
SPG11-225ENST00000561391 IGFL2Q6UWQ7 119 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ZNF66Q6ZN08 573 aa3□□□□□ -1.93
SPG11-225ENST00000561391 RINLQ6ZS11 566 aa3□□□□□ -1.93
SPG11-225ENST00000561391 FAM92BQ6ZTR7 304 aa3□□□□□ -1.93
SPG11-225ENST00000561391 SH2D5Q6ZV89 423 aa3□□□□□ -1.93
SPG11-225ENST00000561391 PRUNE1Q86TP1 453 aa3□□□□□ -1.93
SPG11-225ENST00000561391 CRLF3Q8IUI8 442 aa3□□□□□ -1.93
SPG11-225ENST00000561391 CCDC71Q8IV32 467 aaPredicted RBP3□□□□□ -1.93
SPG11-225ENST00000561391 NUDCD3Q8IVD9 361 aa3□□□□□ -1.93
SPG11-225ENST00000561391 KLHDC8BQ8IXV7 354 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ADGRF3Q8IZF5 1079 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ZNF567Q8N184 647 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ARHGAP24Q8N264 748 aa3□□□□□ -1.93
SPG11-225ENST00000561391 UMODL1-AS1Q8N2C9 162 aa3□□□□□ -1.93
SPG11-225ENST00000561391 TTC30BQ8N4P2 665 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ATPAF2Q8N5M1 289 aa3□□□□□ -1.93
SPG11-225ENST00000561391 RTL3Q8N8U3 475 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 CCDC63Q8NA47 563 aa3□□□□□ -1.93
SPG11-225ENST00000561391 SLC38A9Q8NBW4 561 aa3□□□□□ -1.93
SPG11-225ENST00000561391 PPHLN1Q8NEY8 458 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 OR52K2Q8NGK3 314 aa3□□□□□ -1.93
SPG11-225ENST00000561391 OR6K2Q8NGY2 324 aa3□□□□□ -1.93
SPG11-225ENST00000561391 RDH11Q8TC12 318 aa3□□□□□ -1.93
SPG11-225ENST00000561391 MGARPQ8TDB4 240 aa3□□□□□ -1.93
SPG11-225ENST00000561391 TCP10LQ8TDR4 215 aa3□□□□□ -1.93
SPG11-225ENST00000561391 DQX1Q8TE96 717 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 SLC37A2Q8TED4 501 aa3□□□□□ -1.93
SPG11-225ENST00000561391 RAB7BQ96AH8 199 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ZBTB9Q96C00 473 aa3□□□□□ -1.93
SPG11-225ENST00000561391 CCDC126Q96EE4 140 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ALG14Q96F25 216 aa3□□□□□ -1.93
SPG11-225ENST00000561391 PERPQ96FX8 193 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ZNF845Q96IR2 970 aaPredicted RBP3□□□□□ -1.93
SPG11-225ENST00000561391 UBXN10Q96LJ8 280 aa3□□□□□ -1.93
SPG11-225ENST00000561391 C7orf26Q96N11 449 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ANKRD27Q96NW4 1050 aa3□□□□□ -1.93
SPG11-225ENST00000561391 MAP3K3Q99759 626 aa3□□□□□ -1.93
SPG11-225ENST00000561391 KIFC1Q9BW19 673 aa3□□□□□ -1.93
SPG11-225ENST00000561391 TSSK1BQ9BXA7 367 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms