RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 EPB42P16452 691 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 GPX3P22352 226 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 SRD5A2P31213 254 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 GMPRP36959 345 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 CLDN18P56856 261 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 PHEXP78562 749 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 KBTBD12Q3ZCT8 623 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 PODNL1Q6PEZ8 512 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 ZNF474Q6S9Z5 364 aaPredicted RBP16.79■□□□□ 0.28
TPM1-226ENST00000560959 MILR1Q7Z6M3 343 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 RNF175Q8N4F7 328 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 OR4K14Q8NGD5 310 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 PGM2Q96G03 612 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 FAM111AQ96PZ2 611 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 NODALQ96S42 347 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 MTERF1Q99551 399 aaKnown RBP16.79■□□□□ 0.28
TPM1-226ENST00000560959 CXorf56Q9H5V9 222 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 TAS2R10Q9NYW0 307 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 NUDT4Q9NZJ9 180 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 H0YIV9 168 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 SMNDC1O75940 238 aaKnown RBP eCLIP16.78■□□□□ 0.281e-8■■□□□ 11.9
TPM1-226ENST00000560959 SOX30O94993 753 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 POU2F1P14859 743 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 STMN1P16949 149 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 STARP49675 285 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 KRTAP1-1Q07627 177 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 DDX39BQ13838 428 aaKnown RBP16.78■□□□□ 0.28
TPM1-226ENST00000560959 CAPRIN1Q14444 709 aaKnown RBP16.78■□□□□ 0.28
TPM1-226ENST00000560959 C6orf163Q5TEZ5 329 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 PLXDC2Q6UX71 529 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 PLCZ1Q86YW0 608 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 TMEM171Q8WVE6 324 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 REPS1Q96D71 796 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 HS3ST6Q96QI5 342 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 CAB39LQ9H9S4 337 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 GALNT9Q9HCQ5 603 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 KLRF1Q9NZS2 232 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 MAPRE3Q9UPY8 281 aa16.78■□□□□ 0.28
TPM1-226ENST00000560959 DSCAMO60469 2012 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 MED12Q93074 2177 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 RNF212BA8MTL3 300 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 FOXE1O00358 373 aaPredicted RBP16.77■□□□□ 0.28
TPM1-226ENST00000560959 PHGDHO43175 533 aaKnown RBP16.77■□□□□ 0.28
TPM1-226ENST00000560959 UGDHO60701 494 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 IFNA2P01563 188 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 CD8BP10966 210 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 KIR2DL2P43627 348 aaPredicted RBP16.77■□□□□ 0.28
TPM1-226ENST00000560959 XKP51811 444 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 MAP4K2Q12851 820 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 FGFBP1Q14512 234 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 ZKSCAN8Q15776 578 aaPredicted RBP16.77■□□□□ 0.28
TPM1-226ENST00000560959 P4HA3Q7Z4N8 544 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 BTLAQ7Z6A9 289 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 ISCA2Q86U28 154 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 NUDT13Q86X67 352 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 MED12LQ86YW9 2145 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 ANKMY2Q8IV38 441 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 GBP7Q8N8V2 638 aaPredicted RBP16.77■□□□□ 0.28
TPM1-226ENST00000560959 FBXO36Q8NEA4 188 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 OMA1Q96E52 524 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 LCORQ96JN0 433 aaPredicted RBP16.77■□□□□ 0.28
TPM1-226ENST00000560959 OSBPL9Q96SU4 736 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 GPR22Q99680 433 aa16.77■□□□□ 0.28
TPM1-226ENST00000560959 A0A1W2PS29 197 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 C2orf72A6NCS6 295 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 PRAMEF25A6NGN4 478 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 E7ESA3 106 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 TO15178 435 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 EMC8O43402 210 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 CGAP01215 116 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 CPMP14384 443 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 PORP16435 677 aaPredicted RBP16.76■□□□□ 0.27
TPM1-226ENST00000560959 DRD5P21918 477 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 CCKARP32238 428 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 HMBOX1Q6NT76 420 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 VWA1Q6PCB0 445 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 SH2D5Q6ZV89 423 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 CHMP1BQ7LBR1 199 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 CNEP1R1Q8N9A8 125 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 TMCO6Q96DC7 493 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 LRRC1Q9BTT6 524 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 DDX47Q9H0S4 455 aaKnown RBP16.76■□□□□ 0.27
TPM1-226ENST00000560959 ZNF639Q9UID6 485 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 DTX4Q9Y2E6 619 aa16.76■□□□□ 0.27
TPM1-226ENST00000560959 CHD3Q12873 2000 aaKnown RBP16.75■□□□□ 0.27
TPM1-226ENST00000560959 RAI1Q7Z5J4 1906 aaPredicted RBP16.75■□□□□ 0.27
TPM1-226ENST00000560959 FRG2CA6NGY1 282 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 SLC22A20A6NK97 555 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 ZIC3O60481 467 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 ABCB7O75027 752 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 UGT2B11O75310 529 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 SEMA3DO95025 777 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 PEPDP12955 493 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 NT5EP21589 574 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 RAB10P61026 200 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 HMGCS1Q01581 520 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 DMTNQ08495 405 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 PLCXD2Q0VAA5 305 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 PDIA2Q13087 525 aaKnown RBP16.75■□□□□ 0.27
TPM1-226ENST00000560959 TNK1Q13470 666 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms