RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 RYDENQ9NUL5 291 aaKnown RBP11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 TAS2R9Q9NYW1 312 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 SH3BP4Q9P0V3 963 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 BAIAP2L1Q9UHR4 511 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF639Q9UID6 485 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 WBP11Q9Y2W2 641 aaKnown RBP11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 TMED5Q9Y3A6 229 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 CHCHD2Q9Y6H1 151 aaPredicted RBP11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 HECTD1Q9ULT8 2610 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 USP9XQ93008 2570 aaPredicted RBP11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 POLEQ07864 2286 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 WIPF3A6NGB9 483 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 TMEM114B3SHH9 223 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 LSM1O15116 133 aaKnown RBP11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 LYPLA1O75608 230 aaPredicted RBP11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 SDC1P18827 310 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 MAPK1P28482 360 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 GPC1P35052 558 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 MASP1P48740 699 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 EMDP50402 254 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 DCAF7P61962 342 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF155Q12901 538 aaPredicted RBP11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 SLC10A1Q14973 349 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 KIAA0040Q15053 153 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 ATP6AP1LQ52LC2 224 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 HHATQ5VTY9 493 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 ANKRD26P1Q6NSI1 321 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 TMEM107Q6UX40 140 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 MAMDC2Q7Z304 686 aaPredicted RBP11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 FAM109AQ8N4B1 249 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 TMEM251Q8N6I4 163 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 OR7G2Q8NG99 324 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 PPCDCQ96CD2 204 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 TUBGCP3Q96CW5 907 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 ERP27Q96DN0 273 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 OMA1Q96E52 524 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 HSPBAP1Q96EW2 488 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 PGM2Q96G03 612 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 CCDC120Q96HB5 630 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 PPP1R36Q96LQ0 422 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF597Q96LX8 424 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 PPP3R2Q96LZ3 170 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 METTL7AQ9H8H3 244 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 DDX18Q9NVP1 670 aaKnown RBP11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 B4GALT7Q9UBV7 327 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 GIMAP2Q9UG22 337 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZDHHC2Q9UIJ5 367 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF835Q9Y2P0 537 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 OR10H1Q9Y4A9 318 aa11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 SETXQ7Z333 2677 aaKnown RBP11.93□□□□□ -0.5
CTDSPL2-209ENST00000560620 MYO1GB0I1T2 1018 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 NPIPA2E9PIF3 369 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 NPIPA3F8WFD2 350 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 ACOX3O15254 700 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 BIRC5O15392 142 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 PDPK1O15530 556 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 COQ9O75208 318 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 NME6O75414 186 aaPredicted RBP11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 ERN1O75460 977 aaKnown RBP11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 REM1O75628 298 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 PPM1BO75688 479 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 SERPINE1P05121 402 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 DRD5P21918 477 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 GDF1P27539 372 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 MC3RP41968 323 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 PPICP45877 212 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 ASMTP46597 345 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 ABCE1P61221 599 aaKnown RBP11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 HSPB3Q12988 150 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 DUSP8Q13202 625 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 TOMM20Q15388 145 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 PDCD2Q16342 344 aaPredicted RBP11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 PRSS53Q2L4Q9 553 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 UGT3A2Q3SY77 523 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 TBCELQ5QJ74 424 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 BICRALQ6AI39 1079 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 RNF165Q6ZSG1 346 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 SZRD1Q7Z422 152 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 CD163Q86VB7 1156 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 SLC44A2Q8IWA5 706 aaPredicted RBP11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 EID3Q8N140 333 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 FNDC5Q8NAU1 212 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 MGARPQ8TDB4 240 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 RILPQ96NA2 401 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 GLIPR2Q9H4G4 154 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 REEP4Q9H6H4 257 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 SH2D2AQ9NP31 389 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZFP64Q9NPA5 681 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 TAS2R7Q9NYW3 318 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 KLRF1Q9NZS2 232 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 CNOT11Q9UKZ1 510 aaKnown RBP11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 ACTL7BQ9Y614 415 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 DIDO1Q9BTC0 2240 aaKnown RBP11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 MYO7BQ6PIF6 2116 aa11.92□□□□□ -0.5
CTDSPL2-209ENST00000560620 UTP20O75691 2785 aaKnown RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 PTPN13Q12923 2485 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 FRG2CA6NGY1 282 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms