RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 MOAP1Q96BY2 351 aa11□□□□□ -0.65
LDLR-212ENST00000560467 PHF12Q96QT6 1004 aa11□□□□□ -0.65
LDLR-212ENST00000560467 CDRT15Q96T59 188 aa11□□□□□ -0.65
LDLR-212ENST00000560467 PRTFDC1Q9NRG1 225 aa11□□□□□ -0.65
LDLR-212ENST00000560467 MMACHCQ9Y4U1 282 aa11□□□□□ -0.65
LDLR-212ENST00000560467 MAU2Q9Y6X3 613 aa11□□□□□ -0.65
LDLR-212ENST00000560467 SEC23IPQ9Y6Y8 1000 aaKnown RBP11□□□□□ -0.65
LDLR-212ENST00000560467 F8P00451 2351 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 C4orf51C9J302 202 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 CYR61O00622 381 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 GSC2O15499 205 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 HNRNPRO43390 633 aaKnown RBP10.99□□□□□ -0.65
LDLR-212ENST00000560467 IFNA16P05015 189 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 FHP07954 510 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 ZCCHC18P0CG32 403 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 TNNI3P19429 210 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 UQCRC2P22695 453 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 SOAT1P35610 550 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 FEN1P39748 380 aaKnown RBP10.99□□□□□ -0.65
LDLR-212ENST00000560467 AIMP2Q13155 320 aaKnown RBP10.99□□□□□ -0.65
LDLR-212ENST00000560467 MINDY4Q4G0A6 757 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 RIPOR1Q6ZS17 1223 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 PRSS41Q7RTY9 318 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 SCUBE1Q8IWY4 988 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 CCDC116Q8IYX3 515 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 SLC34A3Q8N130 599 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 ARHGEF39Q8N4T4 335 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 OR8J3Q8NGG0 315 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 DNAJB14Q8TBM8 379 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 METTL21AQ8WXB1 218 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 CIDECQ96AQ7 238 aaPredicted RBP10.99□□□□□ -0.65
LDLR-212ENST00000560467 SLC7A6OSQ96CW6 309 aaPredicted RBP10.99□□□□□ -0.65
LDLR-212ENST00000560467 DGAT2Q96PD7 388 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 CGREF1Q99674 301 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 C14orf105Q9NVL8 296 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 NXT1Q9UKK6 140 aaKnown RBP10.99□□□□□ -0.65
LDLR-212ENST00000560467 CNTRLQ7Z7A1 2325 aa10.99□□□□□ -0.65
LDLR-212ENST00000560467 APCP25054 2843 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 FER1L5A0AVI2 2057 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 MYO1GB0I1T2 1018 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 PRSS44E7EML9 344 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 CLIC1O00299 241 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 SOCS6O14544 535 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 GSTA4O15217 222 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 SOX30O94993 753 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 C6orf47O95873 294 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 ALBP02768 609 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 GSNP06396 782 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 SLC35E2P0CK97 266 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 CPMP14384 443 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 NQO1P15559 274 aaKnown RBP10.98□□□□□ -0.65
LDLR-212ENST00000560467 NT5EP21589 574 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 ME2P23368 584 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 MMP11P24347 488 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 MAGEA8P43361 318 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 GCGRP47871 477 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 PRIM2P49643 509 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 PER3P56645 1201 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 TXNL4AP83876 142 aaKnown RBP10.98□□□□□ -0.65
LDLR-212ENST00000560467 FOLH1Q04609 750 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 HSPB3Q12988 150 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 PAGE3Q5JUK9 113 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 LRIF1Q5T3J3 769 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 DNAJC14Q6Y2X3 702 aaPredicted RBP10.98□□□□□ -0.65
LDLR-212ENST00000560467 SHISA6Q6ZSJ9 500 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 COX15Q7KZN9 410 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 ASRGL1Q7L266 308 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 SZRD1Q7Z422 152 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 RETREG3Q86VR2 466 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 FBXW8Q8N3Y1 598 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 KIF2BQ8N4N8 673 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 OR56A1Q8NGH5 318 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 GOT1L1Q8NHS2 421 aaPredicted RBP10.98□□□□□ -0.65
LDLR-212ENST00000560467 FAR1Q8WVX9 515 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.98□□□□□ -0.65
LDLR-212ENST00000560467 MIEF2Q96C03 454 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 VPS50Q96JG6 964 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 PTCHD1Q96NR3 888 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 AMDHD1Q96NU7 426 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 ANKRD27Q96NW4 1050 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 MESP1Q9BRJ9 268 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 TRIM15Q9C019 465 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 SLC52A3Q9NQ40 469 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 THUMPD1Q9NXG2 353 aaKnown RBP10.98□□□□□ -0.65
LDLR-212ENST00000560467 FAF1Q9UNN5 650 aaPredicted RBP10.98□□□□□ -0.65
LDLR-212ENST00000560467 EXO1Q9UQ84 846 aaKnown RBP10.98□□□□□ -0.65
LDLR-212ENST00000560467 HS3ST3B1Q9Y662 390 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 FBN2P35556 2912 aa10.98□□□□□ -0.65
LDLR-212ENST00000560467 CCDC168Q8NDH2 2452 aa10.97□□□□□ -0.65
LDLR-212ENST00000560467 FAM227AF5H4B4 570 aa10.97□□□□□ -0.65
LDLR-212ENST00000560467 CDC123O75794 336 aaPredicted RBP10.97□□□□□ -0.65
LDLR-212ENST00000560467 BCAS2O75934 225 aaPredicted RBP10.97□□□□□ -0.65
LDLR-212ENST00000560467 HEXBP07686 556 aa10.97□□□□□ -0.65
LDLR-212ENST00000560467 C8orf89P0DMQ9 161 aa10.97□□□□□ -0.65
LDLR-212ENST00000560467 EDN3P14138 238 aa10.97□□□□□ -0.65
LDLR-212ENST00000560467 CPOXP36551 454 aa10.97□□□□□ -0.65
LDLR-212ENST00000560467 ZFP36L2P47974 494 aaKnown RBP10.97□□□□□ -0.65
LDLR-212ENST00000560467 CCT3P49368 545 aaKnown RBP10.97□□□□□ -0.65
LDLR-212ENST00000560467 SLC7A2P52569 658 aa10.97□□□□□ -0.65
LDLR-212ENST00000560467 WNT3P56703 355 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms